| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0835 |
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| Symbol | |
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| ID | 4268261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 945428 |
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| End bp | 947152 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638125587 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_741679 |
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| Protein GI | 114319996 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.475223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAG ATAATGAACC GCAACCGTCT GACAACCAGC AATCAATCAC CAACTCCGGC
GAGATGGCCT CTGTGGGCGT GCCTGCGCCC GAGGGGCCGG CCAACCTGAT CGACACCGAT
TATGTCATTG GCCAGGACAA CATCACCGGC CAGATCCGGC TCAACCTGGA CATTCACGGC
AAGGTCTTTG CCATCTCCGC GCTGGTCACC GTGTTTTTTG TGGTCCTCAC CCTGGCCCTG
CAGGACGAGG TGGCGCCGCT GTTCGAGGCC ACCCGTGTCT GGCTCACCAG TAATCTCGCT
TGGTTCTTCC TGCTCGCCGG CAACATCTTT GTGCTGGTCT GTCTCGCCCT GATCTTCTCG
CCACTGGGCC GGGTCCGTAT CGGGGGGGCG GAGGCGACAC CCGATTTCTC CTACCTCGGC
TGGTTCTCCA TGCTCTTCGC CGCGGGTATG GGCATAGGGC TGATGTTCTT CGCCGTCTCC
GAGCCCATCA GTCACTTCGG CACTGCCATG GGCGGCATCG CCCTGGAGGA CGGGGCTCGC
ACCGACTGGG CGCCGCTGGG GGCCGCCGAG GGGAATACCG AGGCGGCGAT CCGGCTGGGG
ATGGCAGCGA CCATCTTCCA CTGGGGCCTG CACCCGTGGG CGATCTACGC CGTGGTGGCC
CTGGCACTGG CCATCTTCGC CTACAATAAG GGGCTGCCGC TGACCGTGCG CTCCATCTTC
TACCCCCTGC TCGGTGAGCG CGTCTGGGGT TGGCCGGGGC ACCTCATCGA CATGTTGGCG
GTCTTTGCGA CCCTGTTCGG CCTGGCCACC TCCCTGGGGC TGGGCGCACA GCAGGCCTCC
GCAGGGCTCA GCCACCTGTT CGGAATCCCT GAGGGCAACC TGACCATGGT GCTGCTGATC
CTGGGGATCA CGGCCGTGGC CATCGTCTCG ATCGTGGCGG GGGTGGACAA GGGCGTTAAG
CGTCTCTCCG AGATCAACAT GTTCGTCGCG GGCCTGTTGA TGTTCTTCGT CATCTTCGTC
GGGCCGACAC TCCTGATATT TACCGGGGTG TTCCAGAACC TGATGGCCTA CCTGGTCAAC
CTGCCGGCGC TGTCCATGCC CTTCGGGCGC GAGGACAGCA ACTTCACCGA GGGCTGGACG
GCCTTCTACT GGGCCTGGTG GATCAGCTGG TCACCCTTTG TCGGCATGTT CATCGCCCGC
GTGAGCCGCG GTCGCTCGGT CCGTGAGTTC CTGATCGCGG TCCTGCTGGT GCCGTCCATG
GTCTCCGTGC TTTGGATGAC CGCCTTTGGT GCCACCGCCA TCGATCAGGT GGTCAACCAG
GGCTTTGAGG GCGTGCGCGA GGCGGCACTG GAACTCCAGC TCTTCGTCAT GCTCGGCGAA
CTGCCGTTGG CGCAGATCAC CTCGTTCGTG GGCATCTTGT TGGTGGTGGT CTTCTTCATT
ACCTCGTCCG ATTCCGGTTC GCTGGTGATC GACACCATCA CCTCCGGTGG CAAGGTGGAT
GCGCCCAAGC CGCAGCGGGT GTTCTGGGCC ATCATCGAGG GGCTGATCGC CATCGCCCTG
CTGATCGGTG GCGGGCTGGC GGCCCTGCAG GCCATGGCCA TCTCCACCGG TCTGCCCTTC
ACGCTGGTCC TGCTGGTGGG CTGCTATGCC ATCTTCAAGG GCCTGATGTC CGAGCCCCGG
GGTCTCCCGG AGCCGGAGGA GGGGCAGAAG GAGCCCAGCC GGTAA
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| Protein sequence | MAKDNEPQPS DNQQSITNSG EMASVGVPAP EGPANLIDTD YVIGQDNITG QIRLNLDIHG
KVFAISALVT VFFVVLTLAL QDEVAPLFEA TRVWLTSNLA WFFLLAGNIF VLVCLALIFS
PLGRVRIGGA EATPDFSYLG WFSMLFAAGM GIGLMFFAVS EPISHFGTAM GGIALEDGAR
TDWAPLGAAE GNTEAAIRLG MAATIFHWGL HPWAIYAVVA LALAIFAYNK GLPLTVRSIF
YPLLGERVWG WPGHLIDMLA VFATLFGLAT SLGLGAQQAS AGLSHLFGIP EGNLTMVLLI
LGITAVAIVS IVAGVDKGVK RLSEINMFVA GLLMFFVIFV GPTLLIFTGV FQNLMAYLVN
LPALSMPFGR EDSNFTEGWT AFYWAWWISW SPFVGMFIAR VSRGRSVREF LIAVLLVPSM
VSVLWMTAFG ATAIDQVVNQ GFEGVREAAL ELQLFVMLGE LPLAQITSFV GILLVVVFFI
TSSDSGSLVI DTITSGGKVD APKPQRVFWA IIEGLIAIAL LIGGGLAALQ AMAISTGLPF
TLVLLVGCYA IFKGLMSEPR GLPEPEEGQK EPSR
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