Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0803 |
Symbol | |
ID | 4270634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 900165 |
End bp | 903719 |
Gene Length | 3555 bp |
Protein Length | 1184 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638125554 |
Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_741647 |
Protein GI | 114319964 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.316931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGACCC CAGCGCTGCA GCCCGGTTTC ATGGTGGTCC ACGGCAACCG CCTGGAGGAC CTCCGCGCTC TGATCGTGGA GTGGATGCAG GCCTATCCAC CGGCACCGTT GGAGACCGAA ACCGTCTTGG TGCAGAGCAA CGGCATGGCC CAGTGGCTCA GCCATGCCCT CGCGGCTCAC CCGGAGTCGG AGGAGCCGGG TTGCGGGATC GCCGCCGGTC TGTCCATGCA GCTCCCGGCC CGTTTCACCT GGACCGCCTA CCGCGAGGTG CTGGGGCACG AGGCGGTGCC CCCGGAGTCT CCCTTCGACA AGCGGCCGCT CACCTGGCGG CTGATGCGCC TGCTGCCGGA GCTCATCGAT GAGCCCGGGT TCGAGCCGCT GCGGGGCTTC CTGGCCCGGG ACGATGACCG GCGTAAGCGC CACCAACTGG CCGAGCGCCT GGCCGACCTG CTGGACCAGT ACCAGGTCTA CCGGGCCGAC TGGCTGGTGG ACTGGGCGCA GGGGCACGAT CAATGCGCCG GCCCGGGCCG GGCGCCGCGC CCCCTGGATG CGCGCGAGCG ATGGCAACCC CGGCTCTGGC GCGCCCTGCT GGCGGACATG GACGAGGCGG AGCGGGGGTT GAGCCGGGCC GCCATCCACG CCCGCTACCG GGAGGCGGTG CGCGAACTGG ACCGGCGGCC GGCGGGACTC CCGCGCCGGC TCATCGTCTT CGGCATCTCT TCATTGCCCC ACCAGGTGCT TGAGGCGCTG GAGGCCCTGG CCGACTTCAC CCAGATCCTG GTCTGCGTTC ACAACCCCTG CGAGCACTAC TGGGCGGACA TCGTTGCCGA CAAGGACCTG CTGCGCGCCC GTCGCCGCCG GCAGTCGCCC AAGCCGGGCA TGCCCGAACG GCTGGACGAT AGCGAGCTGC ACAATCACGC TCAACCGCTG CTGGCGGCCT GGGGCAAGCA GGGCCGGGAC TACATCCGCC TGCTGGACGA ACATGATGAT CCGGCGCACT ATCGCCACCT GATTGAATCC CTCTCCTGGC AGCGCATCGA CCTCTTCCGA CCCCACGGGG GCGACTGCCT GCTGCACCAA CTGCAGGACG ATATCCGCGA GCTCCGCCCG CTGGCCGAGA CCCGGGCCGC CTGGCCGCCG GTGGCCGCCG ATGACGCCTC GATCCAGTTC CACATCGCCC ACAGCCCCCA GCGCGAGGTG GAGATCCTCC ACGACCGGCT GCTGGGGCGG TTCAATGACG CCTCACGCCC CACCCTCCGG CCGCGCGATG TCATCGTGAT GGTCCCGGAC ATCGACCGCT ACGCCCCCCA CATTCAGGCG GTCTTCGGCC AGACCGAGCC GGGCGACCCG CGCCATATCC CCTATACCCT CTCCGACCAG GGCCGACGCG GTCGCGACAC CGTTCTTATC GCCCTGGAGC AACTGCTGCA TCTGCCGGAG AGCCGCTGCG CGGTCAGCGA GCTGCTGGAC CTGCTGGACG TACCCGCCCT TCGGCGCCGC TTTGGTCTGG AGGAGGGAGA CCTGCAGCGG CTCCACCGCT GGGCCGAAGG GGCCGGAGTG CGCTGGGGCC TGGATGCCGA GCAGCGGGCG CACCTGGACC TGCCCGCCGG GCTTACGCTG CATACCTGGC GCTTTGGCCT GCGCCGGATG CTGCTCGGCT ACGCCGTCGG CAGCGGCGAG GCCTGGCACG GGGTGGAGCC CTACGACGAG GTGGGCGGCC TGGACGCCGC CCTGCTGGGA CCGCTGGAGC AGTTGCTCGC CACTCTGGAG GCCGCCTGGG CGCGGCTGCG TGAAGCGCAT GCCCCGGCGG TCTGGGGCGA GCATCTGCGT TGGCTGCTGG CGGCCTGTTT CGAGCCCGGA AACGAGGAGG AGGCCCTCAC CCTGGAGCGA TTGCAACAGA CCCTGGAGCA ATGGACGGCG GATTGCGAGG CGGCCGCCCT GGACGAGCCG CTACCGCTGA ACGTGGTGCG CGAGCACTGG CTGGCCGGCA TGGACGAGGG CGGGTTGAGC CAGCGCTTCC TCGCCGGAGC CGTCAACTTC TGCACCCTGA TGCCCATGCG CGCCATTCCC TTCCGCCTGA TCTGCCTGCT GGGAATGAAC GACGGTGACT ACCCGCGCAG CCCCACACCG CTGGACTTTG ACCTGATGGC GGACGACTAC CGCCCGGGCG ACCGTTCCCG GCGGGAGGAT GACCGCTATC TGTTCCTGGA GGCCCTGCTC TCGGCCCGCG AGCAGCTCTA TATCAGTTGG GTGGGGCGCA GTGTGCGCGA TAACGAACCC CAACCGCCCT CCGTGCTGGT GGGCCAGCTA CGTGATCACC TGGCCGCCGG TTGGCGGTTG GCAGGGCCGG TGGATGAGCC GTCGACGCCG GAGACGGCGG CGCTGCTCGA GCACCTGACC CTGGCGCACC CCCTGCAGCC CTTCAGCCCC GTCCACTTTC CGGTGGCCGG CGGGCCGGGT GCAAGGCACT TCACCTATGC CCGGGAGTGG CGGGCGGTGC AGGCCGCGGC GGCCGGCGCC GAGGAGGGCG AGGTGCGGCC CGGCATCGAC CGGCCGGACA ACGAGCCGCT GCCGCCCCCG GATCCGGACC AGGCCGGGGT GTTGGCCCCG GGGACCCTGG CCCGGTTTCT CCAGCGGCCG GTGCGGGCCT TCTTTGAACG CCGGCTGTCG GTCCACTTCG ACGAGGACGA GGCGGCCAGC GAGGACCTGG AACCCTTCAC CGTGGACGGC CTGACCCGCT GGCAGCTGCG CGAGCGGCTG GTCCAGGCTG GACTCACCCG GGCCGAGGGA CCGGAGCAGT GGCCCGTGCT GATGGCCTCG GAGACCGCCC GGCTGCAGCG CAGCGGGGTG TTGCCGGTGG GGGCCGCCGG CACCCTGGAG GGTGAGCGGT TGGTCGGCGA GGCCACCGGG CTGCTGACTC GCTACCATGA ACGCCTCCAG GCCTGCCCCG AGACCCTTCC TCCCGCCGTC CTGGCCCCGC TGAGCCACGC CACCTGGACC CTGGAGGCCC AGGTGGAGGG CCTGCGAAGC GACGGCCGGT CACGCCGGCA GTTGGGCTAT ACCGTCAGCC GTCTCAAAGA CAGCAAGGGC AAGGCGTGGT ACCCCAGCAA GCTGCTGCCG GCCTGGGTTG ATCACCTGAT CGCGAACGCC GCCGCGGGCG GCGTGACCAC CGAGTGGATT GGGCTCGACG CCTCGTTGAC CCTGCCGCCC ATCGACCGGG CGGGGGCCAT CGACCACCTG CAGCGGATCC TGGCCGCCTG GGACGAGGGC CAGCGCCGAC CGCTGCCTTT GGCCTGCCAG ACCGCCTTCG CCTGGTTGCA GGCCGTGGCC GAGGACAAAT CGGACCCGCT GGAGATCGCC AGCTCCGCCT ACGCGGGTGA CGACCACCAG CCCGGTGAGG TGGGCTACGA TCCCTACCTG CGCCGCGCCT ACCCGCATGC CGAGTGGCTG CTGGCCGACC CGGCCTTCGC CCACTGGGCC GAGCGGCTCT ACGGCCCGCT GTGGCAAGCG GTCAAGGCAC AGGATGAGGC CGAAAAGGCA GGAGGCCGCG TATGA
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Protein sequence | MATPALQPGF MVVHGNRLED LRALIVEWMQ AYPPAPLETE TVLVQSNGMA QWLSHALAAH PESEEPGCGI AAGLSMQLPA RFTWTAYREV LGHEAVPPES PFDKRPLTWR LMRLLPELID EPGFEPLRGF LARDDDRRKR HQLAERLADL LDQYQVYRAD WLVDWAQGHD QCAGPGRAPR PLDARERWQP RLWRALLADM DEAERGLSRA AIHARYREAV RELDRRPAGL PRRLIVFGIS SLPHQVLEAL EALADFTQIL VCVHNPCEHY WADIVADKDL LRARRRRQSP KPGMPERLDD SELHNHAQPL LAAWGKQGRD YIRLLDEHDD PAHYRHLIES LSWQRIDLFR PHGGDCLLHQ LQDDIRELRP LAETRAAWPP VAADDASIQF HIAHSPQREV EILHDRLLGR FNDASRPTLR PRDVIVMVPD IDRYAPHIQA VFGQTEPGDP RHIPYTLSDQ GRRGRDTVLI ALEQLLHLPE SRCAVSELLD LLDVPALRRR FGLEEGDLQR LHRWAEGAGV RWGLDAEQRA HLDLPAGLTL HTWRFGLRRM LLGYAVGSGE AWHGVEPYDE VGGLDAALLG PLEQLLATLE AAWARLREAH APAVWGEHLR WLLAACFEPG NEEEALTLER LQQTLEQWTA DCEAAALDEP LPLNVVREHW LAGMDEGGLS QRFLAGAVNF CTLMPMRAIP FRLICLLGMN DGDYPRSPTP LDFDLMADDY RPGDRSRRED DRYLFLEALL SAREQLYISW VGRSVRDNEP QPPSVLVGQL RDHLAAGWRL AGPVDEPSTP ETAALLEHLT LAHPLQPFSP VHFPVAGGPG ARHFTYAREW RAVQAAAAGA EEGEVRPGID RPDNEPLPPP DPDQAGVLAP GTLARFLQRP VRAFFERRLS VHFDEDEAAS EDLEPFTVDG LTRWQLRERL VQAGLTRAEG PEQWPVLMAS ETARLQRSGV LPVGAAGTLE GERLVGEATG LLTRYHERLQ ACPETLPPAV LAPLSHATWT LEAQVEGLRS DGRSRRQLGY TVSRLKDSKG KAWYPSKLLP AWVDHLIANA AAGGVTTEWI GLDASLTLPP IDRAGAIDHL QRILAAWDEG QRRPLPLACQ TAFAWLQAVA EDKSDPLEIA SSAYAGDDHQ PGEVGYDPYL RRAYPHAEWL LADPAFAHWA ERLYGPLWQA VKAQDEAEKA GGRV
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