| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0772 |
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| Symbol | |
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| ID | 4269589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 858649 |
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| End bp | 859374 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638125522 |
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| Product | 20S proteasome, A and B subunits |
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| Protein accession | YP_741616 |
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| Protein GI | 114319933 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.546228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTATT GCCTCGCTGC ATCCCTCAAG GCGGGCCTGG TCTTCGCCGC CGATACCCGC
ACCAACGCCG GCCTGGATCA TGTGAATAGC TTCCGTAAGA TGCACAGCCT TGTCTGGGAA
GGGGACCGGG TACTGGTGTT GCTCAGCGCT GGCAACCTGG CGACCACGCA GGCTGTGGTA
ACCCACCTGC AGCGCGAGGC CGAGAGCGGG GGGCCGTTGA GTGAGGTCCG GCACCTGAGT
GACGCCGCCG ATCACGTGGG CCAGGTCAGT TTGCAGGTCC AGCGTAAATA CCGCGCTGCC
GAGGATATGA GTGCCGTATC GCTGGAGGCT ACCTTTATCC TGGGCGGGCA GATCGGTGAC
GAGCCCACGG GGGCGTTCCT CATCTATCCG CAGGGCAATT TCATCACCTG CTCCGAGGAG
CAGCCCTTCC TGCAGATCGG CGAGACCAAG TACGGCAAAC CAATCCTGGA CCGTATTATC
GAGCCGGGGT TGAGCCTGGA GGATGCCGCG CGCTGCGCCC TGGTCTCTAT CGACTCGACC
ATGCGCTCCA ACCTGTCGGT GGGCCCACCC GTCGATCTGG CCATCTATCC GGCGGGCGCG
CTCCAGCGCC CCCGTATGCT GCGCTACAAG CACAACTCGC CCTATTTTGC CTCCGTCCGC
AAGCACTGGG GCGAGGGGCT GCGCCGTCTC TTTGACGACC TGCCGCGGTT CGATTGGGAG
GGCTGA
|
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| Protein sequence | MTYCLAASLK AGLVFAADTR TNAGLDHVNS FRKMHSLVWE GDRVLVLLSA GNLATTQAVV
THLQREAESG GPLSEVRHLS DAADHVGQVS LQVQRKYRAA EDMSAVSLEA TFILGGQIGD
EPTGAFLIYP QGNFITCSEE QPFLQIGETK YGKPILDRII EPGLSLEDAA RCALVSIDST
MRSNLSVGPP VDLAIYPAGA LQRPRMLRYK HNSPYFASVR KHWGEGLRRL FDDLPRFDWE
G
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