| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0729 |
|---|
| Symbol | |
|---|
| ID | 4268696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 811719 |
|---|
| End bp | 812234 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638125478 |
|---|
| Product | NifU family SUF system FeS assembly protein |
|---|
| Protein accession | YP_741573 |
|---|
| Protein GI | 114319890 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01994] SUF system FeS assembly protein, NifU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.230708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.614003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCGCC AGGTGGCCGC TGGCCGCCGC CGGCTTGGTA TACTCACCGC ATTTATCACC
GGGGAGACCA TGTCCAAGCT CAGCGACCTC TACCGCAAGA TCGTCCTCGC CCACAACCGT
CAGCCCCGCA ATCATCACCC GCTGGAGCCC TGCAGCCACC ATGCGGAGGG GTACAACCCG
GTGTGCGGCG ATCATATCCA GGTGTATCTG CGGCTGGACG AGGCCGGACG GGTGGCGGCG
GCGAGCTTTA CCGGTGAGGC CTGCGCCATC TGCACGGCGT CCAGTTCCAT GATGACCGAA
GTGGTGGCCG GTCTGGATGC CAGCGAGGTG GCGGCACTGT TTCGCCGCTT CGAGGCCATG
CTCACCGAGG ACCCCGCGCA GGGTGAGTCG CTGCCCGGTG AGCTGCCGGT GCTGGCCGGC
GTGCGCCACT TCCCCGGCCG TACCAAGTGT GCCACCTTGT CCTGGCATAC CCTGCTGGCG
GCCCTGGAGG GCGAGCGCGC CGCCAGTACC GAATAG
|
|---|
| Protein sequence | MPRQVAAGRR RLGILTAFIT GETMSKLSDL YRKIVLAHNR QPRNHHPLEP CSHHAEGYNP
VCGDHIQVYL RLDEAGRVAA ASFTGEACAI CTASSSMMTE VVAGLDASEV AALFRRFEAM
LTEDPAQGES LPGELPVLAG VRHFPGRTKC ATLSWHTLLA ALEGERAAST E
|
|---|
| |