| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0689 |
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| Symbol | |
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| ID | 4268848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 764498 |
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| End bp | 766669 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638125438 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_741533 |
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| Protein GI | 114319850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.452404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCGA CGCCACCCGA AGAGATGGAC ACCCTGCCAT CGGCCTACGA ACGCAGCGAG
CGGATCCTGG CCGTGGACCG GCACCCGCGC CTGCTGGAGA GCCTGGACAT GCTGGCCAAC
GCCCGCGGCA TACCCCTGGA CACGGCGGAG ACCCCGGCGG AGGCCCGGAC CCTGGTCCGG
CAGCGGGAGT ACGGGGTGGT ATTGGTGGAC ATGCAGGCCG AGGACACCGC CAGCCTGGAC
CTGATGGAGT GGCTGCACAA CCATCGCGCG GGCATGGACG TGATCGCCCT CACCGCCGAC
CCCACCTGCC GGGCCCCCAT TGAGGCGTTG CGCCGGGGCG CCAGCGAGTT CATCCGCAAG
CCCTTCGCCC CCGAGGCCAT GCTGGCGACC CTGGAGAACA CCCTGGAACG GCGCCGCCTG
TCCCGCCAGA ACGAGCAGAT CCGCCACCGG CTCAAGCGCT CCGAGCGGCT CTACCGCTTC
ATTGTCGACA ACTCCCCCGA TTTCATCTAC GTGCTGGACG CCGAGGGCCG GTTCACCTTC
ATCAACCGCA GCGCCGAGCG GTTGCTGGGG ATGACCCCCG ATACCCTGCT CGGCGAGCAT
TTTCAGTGCC TCATCGCCGA CGAGGACCGC GCGGTGGCCG AGCGCCGCTT CAACGAGCGG
CGCACCGGCC AACGCGCCAC CCACAACCTG GAGCTGCAGC TCGCCCCGCC CGGCGCCGCC
GGACAACCCA CCCGCACGGT GGACCTCACC GCCATGGGCA TCTACGCCGA CGGTGATGCA
CCCCACCCCG GTCAGTTCCT GGGCACCTAC GGTATCGCCC GCGACGTCAC TGATCGGAAA
CACGCGGAGT CCATCGTCCA CTACCAGGCC CACCACGACC TGCTCACCGG CCTGCCCAAC
CGCGCCCTGC TCAAGGACCG CCTGGCTCAG GCCCTGGCCC GGGCCCGCCG CGGGAACGAG
GAAGTGGCGG TGCTCTTCCT GGATCTGGAC CGGTTCAAGG TGGTGAACGA CAGCCTGGGC
CACTCGGTGG GTGACCAACT CCTGCAGCAG GTGGCCCAGC GCCTGCGTGC CTGTCTGCGC
GAGGGCGATA CCCTGGCACG GCTCGGTGGC GATGAGTTCA CCCTGTTACT GCCTGCCATC
CCGGACCGAC CGGCCGTCGA GCGGGTGGCG CAGAAGTGTA TCGATGCCCT GGAACAGCCC
TTCATGGTGC ACAACCACCG ACTCTTCTTG GGGGTGAGTA TCGGCATCGC CCTGTTCCCC
GAGCATGGCG AGACCCTGGA GACCCTGATC AAGCACGCCG ATGTGGCCAT GTACCACGTG
AAGGAGCACG GCAAGGGCCA TTACACCTTC TTCGACCAGG CCATGGGCAG CCGCATCGAC
CACCATCTGA ACATGGAGAC CGGCCTGCGC CGGGCCCTGG AGCAGCACGA GTTCCGTGTG
GCCTACCAGC CGCAGGTAGA CGTGGTCAGC GGCCGGGTCA CGGGGATGGA GGCGCTGATC
CGCTGGCAAC ACCCTGAGAC CGGCGAAGTG AGCCCGCGGG AATTCATCCC GGTGGCAGAA
CAGACCGGCC TGATCCTTCC GATCGGTGAG TGGCTGTTGC GCAGCGCCTG CGAGGAGCTG
CTGCGTTGGC CGGATGGCAA CGAGGGCCTG CGCCTGGCGG TCAATCTCTC GCCGTTACAG
GTCCACCAAC GGGACTTTGT CGACCGCGTA CGGGCCATCT GCGACGAAAC CGGATTCCCG
CTCCGACGGC TCGACTTGGA GATCACCGAG AATCTGCTCA TGCGGGACGT GGAGTCGGTG
GTGGAAAAGC TGCGCACCCT GAGCCGGCTC GGCGTCACCA TCACCATCGA CGACTTCGGC
ACCGGCTACT CTTCCCTGGG CTACCTGCAG CGGCTGCCCA TCCACGCCCT AAAGATCGAC
CAGTCCTTCG TCCACGCCAT CCGCGAGAAT GAAGAGAAAG GCACCCTGGT GGAGACCATC
ATCGCCATGG CCCATGGACT GGGGCTGAAC GTGGTGGCCG AGGGCGTGGA GACAAAACGC
CAGCTCGACT ACCTGCGCCG CCTGCAGTGT GGTCGCATGC AGGGCTTTTA CTTCAGCTAT
CCGCTGAGCG GCCACGAGGC GGTCGACCTG CTGGAAGGCT GGGCGCGCGA ACACCTGGCC
AGCCGCCACT GA
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| Protein sequence | MPPTPPEEMD TLPSAYERSE RILAVDRHPR LLESLDMLAN ARGIPLDTAE TPAEARTLVR
QREYGVVLVD MQAEDTASLD LMEWLHNHRA GMDVIALTAD PTCRAPIEAL RRGASEFIRK
PFAPEAMLAT LENTLERRRL SRQNEQIRHR LKRSERLYRF IVDNSPDFIY VLDAEGRFTF
INRSAERLLG MTPDTLLGEH FQCLIADEDR AVAERRFNER RTGQRATHNL ELQLAPPGAA
GQPTRTVDLT AMGIYADGDA PHPGQFLGTY GIARDVTDRK HAESIVHYQA HHDLLTGLPN
RALLKDRLAQ ALARARRGNE EVAVLFLDLD RFKVVNDSLG HSVGDQLLQQ VAQRLRACLR
EGDTLARLGG DEFTLLLPAI PDRPAVERVA QKCIDALEQP FMVHNHRLFL GVSIGIALFP
EHGETLETLI KHADVAMYHV KEHGKGHYTF FDQAMGSRID HHLNMETGLR RALEQHEFRV
AYQPQVDVVS GRVTGMEALI RWQHPETGEV SPREFIPVAE QTGLILPIGE WLLRSACEEL
LRWPDGNEGL RLAVNLSPLQ VHQRDFVDRV RAICDETGFP LRRLDLEITE NLLMRDVESV
VEKLRTLSRL GVTITIDDFG TGYSSLGYLQ RLPIHALKID QSFVHAIREN EEKGTLVETI
IAMAHGLGLN VVAEGVETKR QLDYLRRLQC GRMQGFYFSY PLSGHEAVDL LEGWAREHLA
SRH
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