Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0689 |
Symbol | |
ID | 4268848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 764498 |
End bp | 766669 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638125438 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_741533 |
Protein GI | 114319850 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.452404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACCGA CGCCACCCGA AGAGATGGAC ACCCTGCCAT CGGCCTACGA ACGCAGCGAG CGGATCCTGG CCGTGGACCG GCACCCGCGC CTGCTGGAGA GCCTGGACAT GCTGGCCAAC GCCCGCGGCA TACCCCTGGA CACGGCGGAG ACCCCGGCGG AGGCCCGGAC CCTGGTCCGG CAGCGGGAGT ACGGGGTGGT ATTGGTGGAC ATGCAGGCCG AGGACACCGC CAGCCTGGAC CTGATGGAGT GGCTGCACAA CCATCGCGCG GGCATGGACG TGATCGCCCT CACCGCCGAC CCCACCTGCC GGGCCCCCAT TGAGGCGTTG CGCCGGGGCG CCAGCGAGTT CATCCGCAAG CCCTTCGCCC CCGAGGCCAT GCTGGCGACC CTGGAGAACA CCCTGGAACG GCGCCGCCTG TCCCGCCAGA ACGAGCAGAT CCGCCACCGG CTCAAGCGCT CCGAGCGGCT CTACCGCTTC ATTGTCGACA ACTCCCCCGA TTTCATCTAC GTGCTGGACG CCGAGGGCCG GTTCACCTTC ATCAACCGCA GCGCCGAGCG GTTGCTGGGG ATGACCCCCG ATACCCTGCT CGGCGAGCAT TTTCAGTGCC TCATCGCCGA CGAGGACCGC GCGGTGGCCG AGCGCCGCTT CAACGAGCGG CGCACCGGCC AACGCGCCAC CCACAACCTG GAGCTGCAGC TCGCCCCGCC CGGCGCCGCC GGACAACCCA CCCGCACGGT GGACCTCACC GCCATGGGCA TCTACGCCGA CGGTGATGCA CCCCACCCCG GTCAGTTCCT GGGCACCTAC GGTATCGCCC GCGACGTCAC TGATCGGAAA CACGCGGAGT CCATCGTCCA CTACCAGGCC CACCACGACC TGCTCACCGG CCTGCCCAAC CGCGCCCTGC TCAAGGACCG CCTGGCTCAG GCCCTGGCCC GGGCCCGCCG CGGGAACGAG GAAGTGGCGG TGCTCTTCCT GGATCTGGAC CGGTTCAAGG TGGTGAACGA CAGCCTGGGC CACTCGGTGG GTGACCAACT CCTGCAGCAG GTGGCCCAGC GCCTGCGTGC CTGTCTGCGC GAGGGCGATA CCCTGGCACG GCTCGGTGGC GATGAGTTCA CCCTGTTACT GCCTGCCATC CCGGACCGAC CGGCCGTCGA GCGGGTGGCG CAGAAGTGTA TCGATGCCCT GGAACAGCCC TTCATGGTGC ACAACCACCG ACTCTTCTTG GGGGTGAGTA TCGGCATCGC CCTGTTCCCC GAGCATGGCG AGACCCTGGA GACCCTGATC AAGCACGCCG ATGTGGCCAT GTACCACGTG AAGGAGCACG GCAAGGGCCA TTACACCTTC TTCGACCAGG CCATGGGCAG CCGCATCGAC CACCATCTGA ACATGGAGAC CGGCCTGCGC CGGGCCCTGG AGCAGCACGA GTTCCGTGTG GCCTACCAGC CGCAGGTAGA CGTGGTCAGC GGCCGGGTCA CGGGGATGGA GGCGCTGATC CGCTGGCAAC ACCCTGAGAC CGGCGAAGTG AGCCCGCGGG AATTCATCCC GGTGGCAGAA CAGACCGGCC TGATCCTTCC GATCGGTGAG TGGCTGTTGC GCAGCGCCTG CGAGGAGCTG CTGCGTTGGC CGGATGGCAA CGAGGGCCTG CGCCTGGCGG TCAATCTCTC GCCGTTACAG GTCCACCAAC GGGACTTTGT CGACCGCGTA CGGGCCATCT GCGACGAAAC CGGATTCCCG CTCCGACGGC TCGACTTGGA GATCACCGAG AATCTGCTCA TGCGGGACGT GGAGTCGGTG GTGGAAAAGC TGCGCACCCT GAGCCGGCTC GGCGTCACCA TCACCATCGA CGACTTCGGC ACCGGCTACT CTTCCCTGGG CTACCTGCAG CGGCTGCCCA TCCACGCCCT AAAGATCGAC CAGTCCTTCG TCCACGCCAT CCGCGAGAAT GAAGAGAAAG GCACCCTGGT GGAGACCATC ATCGCCATGG CCCATGGACT GGGGCTGAAC GTGGTGGCCG AGGGCGTGGA GACAAAACGC CAGCTCGACT ACCTGCGCCG CCTGCAGTGT GGTCGCATGC AGGGCTTTTA CTTCAGCTAT CCGCTGAGCG GCCACGAGGC GGTCGACCTG CTGGAAGGCT GGGCGCGCGA ACACCTGGCC AGCCGCCACT GA
|
Protein sequence | MPPTPPEEMD TLPSAYERSE RILAVDRHPR LLESLDMLAN ARGIPLDTAE TPAEARTLVR QREYGVVLVD MQAEDTASLD LMEWLHNHRA GMDVIALTAD PTCRAPIEAL RRGASEFIRK PFAPEAMLAT LENTLERRRL SRQNEQIRHR LKRSERLYRF IVDNSPDFIY VLDAEGRFTF INRSAERLLG MTPDTLLGEH FQCLIADEDR AVAERRFNER RTGQRATHNL ELQLAPPGAA GQPTRTVDLT AMGIYADGDA PHPGQFLGTY GIARDVTDRK HAESIVHYQA HHDLLTGLPN RALLKDRLAQ ALARARRGNE EVAVLFLDLD RFKVVNDSLG HSVGDQLLQQ VAQRLRACLR EGDTLARLGG DEFTLLLPAI PDRPAVERVA QKCIDALEQP FMVHNHRLFL GVSIGIALFP EHGETLETLI KHADVAMYHV KEHGKGHYTF FDQAMGSRID HHLNMETGLR RALEQHEFRV AYQPQVDVVS GRVTGMEALI RWQHPETGEV SPREFIPVAE QTGLILPIGE WLLRSACEEL LRWPDGNEGL RLAVNLSPLQ VHQRDFVDRV RAICDETGFP LRRLDLEITE NLLMRDVESV VEKLRTLSRL GVTITIDDFG TGYSSLGYLQ RLPIHALKID QSFVHAIREN EEKGTLVETI IAMAHGLGLN VVAEGVETKR QLDYLRRLQC GRMQGFYFSY PLSGHEAVDL LEGWAREHLA SRH
|
| |