Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0665 |
Symbol | |
ID | 4268277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 726956 |
End bp | 730111 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638125414 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_741509 |
Protein GI | 114319826 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCCT TGCGCAAACC GGGCCACGGC CCCGCCCTGA CCATCTGCCT GGCCTACGCG GCGCTCGGGC TGCTGTGGAT TTTCGGCTCA GACCGCCTGT TGCTGGTGCT CATAGAGGAC ACCGAGCTGG TGGCCCGGCT GCAAACCGCC AAGGGCTGGT TCTACGTGCT GGTGACCGCC GGGCTGCTCT ACCTAGTGAT CCGCTTTACC ATCAACACCA CCCGGCTGGA AGAGCAGGCC CGGCGCCCTC GCGCCCCTGA TTCCGACCTG CTCCCCGTTG CCGGCGACTA CTGGGTGCCC GTGGGCATCC TGACCGGGCT CGCCGGCGGA TTGGCGGCGC TCGGTTACCT CTTCTACCAC CAGGTCTCCA GTACCCCCAC GCCCCCGCCG GAAGCGGATA TCCGGCACCT GGCGCGCTGG AGCTTCACCA CCGGTCTGCT GCTGGTGGTC GCAGCGGGCA CGGGCATCAT CCTCTGGTGG CGGGGCCATG TGCACGGTCT GGAGGCCCGA CGGCTACGCA CCGAGTTGAT GGCGCAGGCC GACCTCGCCG CGCGAGAGCG GGCCTACGAG ACCCTGGCGG AAAACTCACC CGACATCATC GTCCGACTCG ACCGCGACCT CCGGCATCTC TACGTCAACC GTGCCCTGGA GGCGTTCACC GGCATCCCGC GGGAGCACTA CCTGGGCCGA ACACACGAGG AGGTCGGCTT CCGCGGCAAA CTGCTCGCGA CCTGGGAGCG GCACCTGAAC CAGGCGCTGG AAAGCGGCGA ACCCGGGACC ATGACCTTTT CCCATCCGGA CCGCGAGGGC CGGGTCCGCC ACTTCGAGGC GCTGATCGTC CCGGAGACCG ATGACACCGG CAATATCGCC CATGTGCTCT GTATCAGCCA CGACGTGACC GGCCACGTCC AGGCCCGCGA GGAGATCAGC CGACTGCGCG ATCTCTACGC TGCCCTCAGC CAGGCCAATC AGGTCATCAT CCGTATCGAC GACCCCAAGG AATTGTTCCA GCGGACCTGC GAGGTGGTGG TCCGGTATGG CCGACTCGAC ATGGCCTGGA TCGGGTTGGT GGATCAGGCC AGTGGCCGCG TCACCCCGGT GAGCCGGGCC GGTCGCGACA TGGGTTATCT GGACGAGATC CGTATCAGTA CCGATCCTGC GCGCCCGGAG AGCCGGGGCC CGGTAGGACG CGCCATCCGC CAGCGGCGGG CCAGCGTGTT CGACCGGTTC CTGGATCACC CGGACGCCGG CCCCTGGCAG GCCGCCGCGG CCCGCCGCGG GTTTCGCTCG GTCGCCGCCT TCCCCCTGTT CCAGAGCGAC GACTGCATCG GCGCATTGGC CGTCTACTCC AGCGAGGAGC GCTTTTTTAG CGCGGATATC ATCCAGCTCA TGGCGGAGAT GACCGGGGAC CTCTCGTTCG CGCTGGACAA CATAGAGCGG GAACAGGCCC GCAAGGCGGC CGAAGAGCAG ATGCGCCTGG CCGAGGAGGT GTTCGAGCAC AGCACCGAGG CCATCATCAT CACCGATGCC AGACAGCGGA TAATGCGGGT GAACCGGGCC TTCACTGAAC GCACCGGCTA TGTCCCCGAC GAGGTGCTCG GCCGGCGCCC GCACATGCTC CGCTCCCCCC ACCACACGCA ACAGTTCTAC CGCCGTATAC TCGCCCGGCT CCGCCGCCAC GGCTTTTGGG AAGGCGAGAT CTGGAACCGG CGCAAGGGGG GCGAAAACGC GCCCCTTTGG CTCACCCTAT CGGTGGTCCG GGACGAGGCA GGGCGGATCA CCCACTATAT CGCGGTAGGC CTTGACCTTA CCGAGACCAA GGATCGCGAG GCGCACATCC GCTACCTGGC CCAGCACGAT CCGGTCACCG GGCTGCCCAA TCGCGGGTTG CTCGCCGACC GATTGGGACA GGCGTTGCGC CGCGCCCAGG ACCAGCACTA CCGGCTGGCC CTGCTGTCGC TGGACCTCGA CCGTTTCAAG ATCATCAACG AAACCCTTGG TCATGTGGCC GGTGACGAGG TGCTGCAAAC GGTGGCGCAG CGCCTGCAAG ACCACGTGAA CGGGGCGGGC ACGGTCTCCC GGATCGGCAG CGATCAGTTT CTGATCCTGC TGCCGGAGAT CCACAAGCCC ACCGAGGCGG CCCAAGCCGC CGAACGCCTG ATGGCCTGCG TCGCCGAGCC ACTGGACCTG AGCGGACAGG AGCTGACCCC CTCCAGCGTC GTGGGCATCG CACTCTACCC CGAAGACGGG GATAACCTCG AGACCCTGCA CAGTCACGCG GATGCGGCCA TGTCGATGGC CAAACAGGCC AGTGGCCATG AGGGCTACCG CTTTTTCAGC AGCGACATGA CCAGCCGCGC CCGCGAGCGC CTGTCGCTGG AGAGCCGGCT GCGCCGCGCA CTGGACCGGG GTGAATTCCG CCTACATTAC CAGCCGCAGG TAAGCCTGGC CGACGGCACC CTCACCGGAA TGGAGGCCCT GCTGCGTTGG CACGCCGGGG ACGAGGGCGA CATCTCACCG GCGCGCTTCA TCCCCATCGC CGAGGAGACG GGGCTGATCG TCCCACTGGG CCGCTGGGTG CTCGGCGAGG CCTGCCGCCA GAACCGCGCC TGGCGGCAGG CCGGGCTTCC CGCCCTACCG GTCTCGGTGA ATCTATCGGT GGTCCAGCTC CGTCGCAGCG ACGTGGTCGC AGACGTGCGC CGGGCACTGG AGACCAGCGG CCTGCCTGGT GACGGGCTCC ACTTGGAGGT CACCGAAAGC CTCTTTTTGA GTGAGGACGA CCCGGCGGTG GTCACCGGTT TCCAGACCCT TCGGGAAATG GGCATCAGTC TGGCCATTGA CGATTTCGGG ACCGGTTATT CCAACCTCGG CTATCTCAAG CGATTGCCCA TCGCCAAGCT GAAGATTGAC CAATCCTTCG TCCGCGGCAT AGGCGACAGC GGCCACGACA CAGCGATCAA CCAGGCCATC ATCAGCATCG CCCGCAGCCT TGGCCTTGGG GTCATCGCCG AAGGGGTGGA GACCGCGGCC GAGTTACGGG TATTACAGGC GCTGGGCTGC GACGAAATCC AAGGCTTTTA CTACAGCCGC CCGCTGGATG CGGAGCGCGC CGGCCAACTG ATGGCGGCTC CACCCCCACT GCATCATGGG GCCTGA
|
Protein sequence | MPALRKPGHG PALTICLAYA ALGLLWIFGS DRLLLVLIED TELVARLQTA KGWFYVLVTA GLLYLVIRFT INTTRLEEQA RRPRAPDSDL LPVAGDYWVP VGILTGLAGG LAALGYLFYH QVSSTPTPPP EADIRHLARW SFTTGLLLVV AAGTGIILWW RGHVHGLEAR RLRTELMAQA DLAARERAYE TLAENSPDII VRLDRDLRHL YVNRALEAFT GIPREHYLGR THEEVGFRGK LLATWERHLN QALESGEPGT MTFSHPDREG RVRHFEALIV PETDDTGNIA HVLCISHDVT GHVQAREEIS RLRDLYAALS QANQVIIRID DPKELFQRTC EVVVRYGRLD MAWIGLVDQA SGRVTPVSRA GRDMGYLDEI RISTDPARPE SRGPVGRAIR QRRASVFDRF LDHPDAGPWQ AAAARRGFRS VAAFPLFQSD DCIGALAVYS SEERFFSADI IQLMAEMTGD LSFALDNIER EQARKAAEEQ MRLAEEVFEH STEAIIITDA RQRIMRVNRA FTERTGYVPD EVLGRRPHML RSPHHTQQFY RRILARLRRH GFWEGEIWNR RKGGENAPLW LTLSVVRDEA GRITHYIAVG LDLTETKDRE AHIRYLAQHD PVTGLPNRGL LADRLGQALR RAQDQHYRLA LLSLDLDRFK IINETLGHVA GDEVLQTVAQ RLQDHVNGAG TVSRIGSDQF LILLPEIHKP TEAAQAAERL MACVAEPLDL SGQELTPSSV VGIALYPEDG DNLETLHSHA DAAMSMAKQA SGHEGYRFFS SDMTSRARER LSLESRLRRA LDRGEFRLHY QPQVSLADGT LTGMEALLRW HAGDEGDISP ARFIPIAEET GLIVPLGRWV LGEACRQNRA WRQAGLPALP VSVNLSVVQL RRSDVVADVR RALETSGLPG DGLHLEVTES LFLSEDDPAV VTGFQTLREM GISLAIDDFG TGYSNLGYLK RLPIAKLKID QSFVRGIGDS GHDTAINQAI ISIARSLGLG VIAEGVETAA ELRVLQALGC DEIQGFYYSR PLDAERAGQL MAAPPPLHHG A
|
| |