| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0635 |
|---|
| Symbol | |
|---|
| ID | 4270824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 685509 |
|---|
| End bp | 686237 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638125383 |
|---|
| Product | formate dehydrogenase gamma subunit |
|---|
| Protein accession | YP_741479 |
|---|
| Protein GI | 114319796 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.11337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG TGAAGAAAAT CAGGGTCCGG GACCGATGGA CCATCCGGCT GCACTGGTTC
AATGCCCTCT GCTGGGCGCT GCTCGTGCCC TCCGGCCTGG GCATTATCAC CGGCGACAGC
CTGCGCCTGG CACCGGCCTG GTGGCCGCAG TTCCTGCAGA ACCTGTTCGG CGGCAACCAG
AACCTCATCC TCTTCCATGT GGTGGTGGGG GTGGCCTGGA TGGTAGGTAT CGGGCTGTTT
ATGCTGTTGC GCTGGCGCAG CGTGGTGCTG CCCTTCCTGC GCAATGTGTT GGTACTCACT
CCGGGGGCGC TCTGGCACGA CCTGCGCACC ATGGTGATCA CCATGGCGCG TCTGTTCGGG
CTGATGAAAG CCGCGCCGAT ACCGCCGCAG GGGCGCTACA ATGGCGCCCA GCGTCTGCTG
GGGACGATGA TCGTCTTCGC CTCCCTGGCC ATCGCGGTGA CCGGGCTTTA CCTCTACTTC
GGGCCGATGG TCTTCCATTT CCCCGACAAC CCGGTCTATG GCGCCCTCTT CCGGTGGGCC
CTGGTGATCC ACGCCGCGGC GGTCTTCCTG GTGCTCATCG GGCTGGTGCC GCACATTTAC
TTCGCCACGG TGGAGGAGCG CGAGTCGCTC GAGACCATGA AGAGCGGCTA CGCGGAGGTG
GACTTCATCA AGCACCACAA TCCGCTCTGG TACGAAGAGC TCAAGCGCAG CGGGCAGCTG
CGGGATTGA
|
|---|
| Protein sequence | MAEVKKIRVR DRWTIRLHWF NALCWALLVP SGLGIITGDS LRLAPAWWPQ FLQNLFGGNQ
NLILFHVVVG VAWMVGIGLF MLLRWRSVVL PFLRNVLVLT PGALWHDLRT MVITMARLFG
LMKAAPIPPQ GRYNGAQRLL GTMIVFASLA IAVTGLYLYF GPMVFHFPDN PVYGALFRWA
LVIHAAAVFL VLIGLVPHIY FATVEERESL ETMKSGYAEV DFIKHHNPLW YEELKRSGQL
RD
|
|---|
| |