| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0628 |
|---|
| Symbol | |
|---|
| ID | 4270610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 677278 |
|---|
| End bp | 678756 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638125375 |
|---|
| Product | putative circadian clock protein, KaiC |
|---|
| Protein accession | YP_741472 |
|---|
| Protein GI | 114319789 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction
[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.60194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0153191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCG CTTCACGCGG CGATGCCTCC GTGGCGGCCG GGCTGCCGGA GCGTGTCTCC
TCCGGCGTGG CCGGCCTTGA CCAGATCCTC GACGGCGGCC TGATCGCCCG TCGCGGTTAC
CTGCTTCGCG GTGGGCCGGG GCTGGGCAAG ACCACGCTCG GCCTCAGTTT TCTCACCGCC
GCCGGCGAGG GGGAGCGCAC GCTCTTCATC GGCTTCCAGG AGCTGGAGGC GGAGCTCCGT
GCCAACGCGG CCACCGTCGG TCTCGACACC CGCGGCATCG AGTTCCTGAG CCTGGCACCA
ACCGAGGAGT TCTTCGCCGG CTCCGAGACC TACGACGTCT TCGCGGCGTC CGATGTCGAG
CAGGCACCGA TGATCGACAC CGTAGTGGAA GCGGTCGAAC GGATCCAGCC GCACCGCGTG
TTCATCGACT CGCTGACACA CCTGCGACTC GTGTCCGCCG ACCGTTACCA GTTCCGCCAA
CAGGTCGTGT CGCTGCTGCG GTTTCTCGTC GAGCGTGGGG CCACCGTGGT GTTCACCTCG
GAGTCGTCCA TGGAGAACCC GGATGACGAT CTCCAGTTTC TCGCCGATGG CGTTATCAAT
CTGGAGGCGG GCCCATCCAG CCGCACGATT GAGGTCTCGA AACTGCGCGG CTCCGCGGCC
CAGCGCGGCC GACACGAGTA CCGCGTCGAT AAGAGCGGCA TTCATGTGTT CCCTCGCACC
GTGCCGCCGA CGCGACGTCT GACGGACGGG GCAGGTACGG TGCAGTTCCG CAGCGGCAAT
GCCGCCTTCG ACGAAATGCT CCATGGTGGC CTCGAGAACG GCACCATCAC GCTGATTACG
GGCCCTAGTG GGATCGGCAA ATCGACGGTG GCGGCCATGA TCGCGGCCGC GGCCGCTCAC
GACGGGCATC GCGCCAGCGT GTTCCAGTTC GAGGAGGAGT TGGACGGCTA TCTCCGGCGC
CTGCGCGCGC TCGATGTCGA TGTCGACGGA CCGCTGCAAT CGAGGGGCCT GGTAGTGGAG
CAGATCGAGC CCTTGCGCTA TCTCGCAGAC GAGTTCATGG GTGATCTGCT GCAGCGTGTC
GAGGACGAGG AAATCGACGT GGTCGTGATC GACAGCGTCA CCGGCTTCGA TATGGCGCTC
AATCAGGACG AGGCCGTCCA GCGGCCGTTG CACACGCTCG CCAAGTCCCT GTCGCGCAGG
GGTGTCACGG TGCTCCTGGT CAACGAGAAC CATTCTTTCG GCGAGGAGTT GCAGATATCG
TCGCGCGAGA TCAGTCATCT GGCGGACAAC GTCATCTTTT TCCGTTACGT GCATGGTGGT
GATCGGCTCG AGAAACTCGT CGGCATCCTC AAGAAACGCA TGTCCGATTT TGATCGCCAG
CAGCGCCGGT TCGAGATCGC CCCGGGTGGC TTCCGCGTCG GGGAGCCGGC GAGCGTGGCG
CCCGGCATGG CTACCCGGCG GGAGACCGAG TCGAAATGA
|
|---|
| Protein sequence | MSSASRGDAS VAAGLPERVS SGVAGLDQIL DGGLIARRGY LLRGGPGLGK TTLGLSFLTA
AGEGERTLFI GFQELEAELR ANAATVGLDT RGIEFLSLAP TEEFFAGSET YDVFAASDVE
QAPMIDTVVE AVERIQPHRV FIDSLTHLRL VSADRYQFRQ QVVSLLRFLV ERGATVVFTS
ESSMENPDDD LQFLADGVIN LEAGPSSRTI EVSKLRGSAA QRGRHEYRVD KSGIHVFPRT
VPPTRRLTDG AGTVQFRSGN AAFDEMLHGG LENGTITLIT GPSGIGKSTV AAMIAAAAAH
DGHRASVFQF EEELDGYLRR LRALDVDVDG PLQSRGLVVE QIEPLRYLAD EFMGDLLQRV
EDEEIDVVVI DSVTGFDMAL NQDEAVQRPL HTLAKSLSRR GVTVLLVNEN HSFGEELQIS
SREISHLADN VIFFRYVHGG DRLEKLVGIL KKRMSDFDRQ QRRFEIAPGG FRVGEPASVA
PGMATRRETE SK
|
|---|
| |