| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0620 |
|---|
| Symbol | |
|---|
| ID | 4270602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 670333 |
|---|
| End bp | 671757 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638125367 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_741464 |
|---|
| Protein GI | 114319781 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00109548 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTG TCCGTCCCGA CAACCCGCTG TTCCGCTACC GCGATGTGGT GGACGACTGG
CCGGCCTTCG AGACGGCGGT GGCCAGTCCG CTGCCGGCGA CCATCTGGGC CCACCCGGCG
CGGATCACCC GCGAGGCCCT GCGCTCGCTG CTGGCTGAGG CGGGTATCGA TGCCCGGCCG
GTGGCCTGGC AGCCCTCGGC CCTGCGTCTG CCCGCCGGGC TGCGTCCGGG GGCGCATTGG
GGGCAGGCCG CCGGGCTTTA CCATGCGCAG GAGGAGGCCA GCATGGTGCC GGTGACGCTG
CTGGATCCGC AGCCCGGTCA CCGGGTGCTC GACCTGTGCG CCGCCCCCGG CAACAAGACC
GCCCAGGCGG CACTGGCGCT GGGAAACCGT GGCACCGTGG TGGCTAACGA TGTGGCCAAG
GGGCGGCTGG CCGCCATCCG TCATCTGATC AAGCGGCTGG GGCTGATGAA CGTCTCGGTC
ACCTGTCGGC CGGCACAGGA CTATTCCCCC CACGCGGGCG GTTTCGACCG GGTCATCGCC
GACGTGCCCT GTAGCTGCGA GGGCACGGTG CGCAAGTCCA GCCAGCCCTC CGCCCAGGCC
CTGTGCGAGA CCCGTGAGCG GCTTGTCGCG CGGCAGACGG CCATTCTCGA CAAGGCGGTG
CGGCTCTGCC GCCCGGGCGG GCGTATCGTC TACTCCACCT GCACCTTTGC CCCGGAGGAG
AACGAACAGG TGGTGGATGC CCTGCTGCGC CGCTACCCGG ACGAACTGCG CTTGCTGCCG
GTGAGCCTGC CCGGGCTGTA CTTGGCACCG GGGCTCACCG GGTGGCGGGG CCGGACCTTC
CTGCCGGAGC TGGCCCAGGC GGTCCGGCTC TGGCCCCACC ACAACAACAC CGGGGGGTTT
TTCATCGCCC TGCTGGAGCG GGTGGGCGGC GAGTGCCGCG AGGGGGCGCG GGCGGCAGAA
CGGCCGACGG ACGGTCACTG GCTGGAGGGT ATTGTCCAGC GCTACGCCAT TCCCGGGTCG
GCCCTGGCCG GGTTGCGGCT GGTCCACCGT GGCCGCAAAT ACGCCCAGCT CATTGCCGCG
GACCACGAGC CGCCGGCCCG GCCGGAGCGG GTGTTCTTCG GTCTGCCGAC CGTCGGGGTG
CAGATGAAGC CGCCCAAACT CACCACCGCC GGGGTGATGG CGCTGGGCGC TTACGCCCGG
CGCAACGTGG TGGAACTGGA CGAAAGCCAG GCGCAGGCCT ATACCCGCCG CCAGGTGGTG
ACGCTGCAAC CGGGGCAGGG CATCGGGCTG GGGGAGAGCG GTTCGGTGGT GGTCCGGCGC
CGGGGCTATG GGCTGGGCCT GGGCGTGGTC AGCCCGGCGG CGGAGGATGG CAGCCGGCAC
CTGGCCAGCC TCTACCCGCG AAGCTGGGCC GCTGAGGTGC CCTGA
|
|---|
| Protein sequence | MGAVRPDNPL FRYRDVVDDW PAFETAVASP LPATIWAHPA RITREALRSL LAEAGIDARP
VAWQPSALRL PAGLRPGAHW GQAAGLYHAQ EEASMVPVTL LDPQPGHRVL DLCAAPGNKT
AQAALALGNR GTVVANDVAK GRLAAIRHLI KRLGLMNVSV TCRPAQDYSP HAGGFDRVIA
DVPCSCEGTV RKSSQPSAQA LCETRERLVA RQTAILDKAV RLCRPGGRIV YSTCTFAPEE
NEQVVDALLR RYPDELRLLP VSLPGLYLAP GLTGWRGRTF LPELAQAVRL WPHHNNTGGF
FIALLERVGG ECREGARAAE RPTDGHWLEG IVQRYAIPGS ALAGLRLVHR GRKYAQLIAA
DHEPPARPER VFFGLPTVGV QMKPPKLTTA GVMALGAYAR RNVVELDESQ AQAYTRRQVV
TLQPGQGIGL GESGSVVVRR RGYGLGLGVV SPAAEDGSRH LASLYPRSWA AEVP
|
|---|
| |