Gene Mlg_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0588 
Symbol 
ID4268322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp639645 
End bp640742 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content72% 
IMG OID638125331 
Productalanine racemase 
Protein accessionYP_741432 
Protein GI114319749 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0886157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.74231e-17 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGGTG AGGCCAGACC CACCCGGGCA CGGATTCGAC TGGAGGCCCT GCGCCACAAC 
TACCGGCTGC TGCGCAGCAG CGCGCCCGGC GCTCGGGTAA TGGCGGTGAT CAAGGCTGAT
GGCTACGGCC ACGGAATCGA CCGCGTAGCC CGCACGCTGG CCGGCGAGGC GGACTGTTTT
GCGGTCAGCG GCGTGGACGA GGCAATGCCT ATCCGCGCGG CCGGGGCCAC CCAGCCGGTG
GTGCTGCTGG GCGGCTTCTT CGCCGCCGCC GAGATCCCCC TGCATGTCCG CGAGGGTTTT
CAGCCCGTCG TCCACTCCTG GTGGCAGGTG GAGGCGCTGG CCTCGGCCGG CCCTCACGAA
TCGCTCGATG TCTGGATCAA GGTCGACAGC GGGATGCACC GCCTGGGCTT TCTGCCCGGT
GAGGTGGCCG AGGTGCACCG CCGCCTTACC GCGCTGCCCA ACCTGCGCCA GATCGGTTTC
CTCACCCACT TGGCCGAGGC CGACGACCGT GACAGCCCGC GCACCCTGGA GCAACTGCGG
GTCTTCGACC AGGCCTGTGC CGGCCTGCCC GGGCCGCGCA GCGCCGCCAA CTCCGCCGGC
ACCCTGGGCT GGCCCGCCGC CCACTACGAC TGGGTGCGCC CCGGTATCTC GCTGTATGGC
GCCTCGCCCT TCATCGACCA GGGCCGTCCT CGGCCCGACC TGCGCCCGGT GATGACCCTG
GAGAGCGGTC TGATCAGCGT CAAACGGCTG CCCGCCGGGG CCCCCATCGG CTATGGCAGC
ACCTGGCGCT GCCCCGAGGC CATGCCGGTG GGGGTGGTCG CCATCGGCTA TGGCGACGGT
TATCCGCGCC ACGCCCCGTC CGGCACCCCG GTGCGGGTGG ACGGAGTGGA AAGCCAGCTC
CTGGGCCGGG TCTCCATGGA CCTGATCACC GTGGACCTGC GCCCCTGCCC GGAGGCCCGG
CCGGGCGCAC CGGTGGTGCT TTGGGGCGAC GGCCTGCCGG CGGAGACCAT CGCCGAGCGG
GCCGGCACCA TTGCCTACGA GCTCTACTGT CAGGTCACCC CGCGTGCCCC GCGCCAGGTG
GTGGCCCCGA CCCGCTGA
 
Protein sequence
MRGEARPTRA RIRLEALRHN YRLLRSSAPG ARVMAVIKAD GYGHGIDRVA RTLAGEADCF 
AVSGVDEAMP IRAAGATQPV VLLGGFFAAA EIPLHVREGF QPVVHSWWQV EALASAGPHE
SLDVWIKVDS GMHRLGFLPG EVAEVHRRLT ALPNLRQIGF LTHLAEADDR DSPRTLEQLR
VFDQACAGLP GPRSAANSAG TLGWPAAHYD WVRPGISLYG ASPFIDQGRP RPDLRPVMTL
ESGLISVKRL PAGAPIGYGS TWRCPEAMPV GVVAIGYGDG YPRHAPSGTP VRVDGVESQL
LGRVSMDLIT VDLRPCPEAR PGAPVVLWGD GLPAETIAER AGTIAYELYC QVTPRAPRQV
VAPTR