Gene Mlg_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0573 
Symbol 
ID4270903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp622297 
End bp622566 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content56% 
IMG OID638125315 
ProductRNA chaperone Hfq 
Protein accessionYP_741417 
Protein GI114319734 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.174076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000517763 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAGG GGCAATCGTT ACAGGAACCG TTCCTGAACG CACTGCGCAA GGAAAAGGTG 
CCGGTATCCA TTTATCTGGT CAATGGGATT AAACTGCAGG GGCAGATTGA ATCGTTCGAC
CAGTTCGTGA TTCTGCTCCG TAACAACGTC AATCAGATGG TGTACAAGCA CGCCATCTCC
ACCGTCGTTC CGGCTCGCAA CGTGCGCACC GCGCCGCCGG TCCCGACGGA GACCCACGCA
CAGTCCAGCG AGGAATTCGG CAATATCTGA
 
Protein sequence
MAKGQSLQEP FLNALRKEKV PVSIYLVNGI KLQGQIESFD QFVILLRNNV NQMVYKHAIS 
TVVPARNVRT APPVPTETHA QSSEEFGNI