| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0572 |
|---|
| Symbol | |
|---|
| ID | 4270902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 621208 |
|---|
| End bp | 622161 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638125314 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_741416 |
|---|
| Protein GI | 114319733 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.246715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000000977532 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCACG CCGTCCGTCA GCCGGGCACG CCCCCGGTGC TCTTCCTGAT GGGGCCGACC
GCCACCGGCA AGACCGATTG TGCCGTGGCC CTGGCCCGGC GGCTGCCGGT GGAGATTATC
AGCGTGGACT CGGCGCTGGT CTACCGGGGT ATGGATATCG GCACCGCCAA GCCCTCCGCG
GCCCTGCTGG CGGAGGTCCC TCACCGGCTG ATCGATATCC TCGATCCCAG CGAGGCCTAC
TCCGCGGCCC GCTTCCGTGC CGATGCGTTG GCGGCCATCC ATGAGATCCA CGCTGCGGGC
CGAGTGCCGC TGCTGGCCGG TGGCACCATG CTTTACTTCC GTGCCCTGGA GCACGGTCTG
TCAGAGCTGC CGGAGGCCGA CCCGGCCCTG CGCCGGCGGC TGGAGGGCGA GGCGGCCGCC
CACGGCTGGG GTGCGCTGCA CGACCGCCTG GCGGCTGTGG ACCCGGAGGC GGCGGCCCGC
ATCCACCCCC ACGACGCCCA GCGCATCCAG CGGGCGCTGG AGGTTTGGGA ACTTACCGGC
CAATCCCTGT CAGAACTACA GAGGGCCGGG CGGCAGCGGC TGCCCTGGCC CATCGGCAAG
TGGGTGCTGA TGCCGGAGTC ACGGGGCGAA CTGCACCGGC GTATCGCCCG GCGCTTCGAC
CAGATGCTGG CGCAAGGCTT CATCGACGAG GTGGCGGCCC TGCGCCAGCG GCCGGACCTG
CATCGGGCGC TGCCGGCGAT GCGCTCGGTC GGCTATCGCC AGGTCTGGGA TTACCTGGAC
GGGTGCTATG ACCGGGAAAC GCTGCGCGAG CGCGGCATCG CCGCCACCCG CCAGTTCGCC
AAGCGCCAGA TCACCTGGCT GCGGCGGGAG CGCGGTGTGA CGGCTTGGTT GACGCCGGAA
CAGGCCCGCG ACGGACTGCC CGAGCGGGTC GGCCGTTTCC TGTCGGGCGG TTGA
|
|---|
| Protein sequence | MSHAVRQPGT PPVLFLMGPT ATGKTDCAVA LARRLPVEII SVDSALVYRG MDIGTAKPSA
ALLAEVPHRL IDILDPSEAY SAARFRADAL AAIHEIHAAG RVPLLAGGTM LYFRALEHGL
SELPEADPAL RRRLEGEAAA HGWGALHDRL AAVDPEAAAR IHPHDAQRIQ RALEVWELTG
QSLSELQRAG RQRLPWPIGK WVLMPESRGE LHRRIARRFD QMLAQGFIDE VAALRQRPDL
HRALPAMRSV GYRQVWDYLD GCYDRETLRE RGIAATRQFA KRQITWLRRE RGVTAWLTPE
QARDGLPERV GRFLSGG
|
|---|
| |