Gene Mlg_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0570 
Symbol 
ID4270900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp617930 
End bp619288 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content69% 
IMG OID638125312 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_741414 
Protein GI114319731 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000000754253 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTTGC CCAATCCGTT GCAATGGTCG ATCATTATCG GGCTCCTGCT GCTCTGCCAT 
TCGGCGCTGC TCTCGGCGCA GACCGAGGTC AGCGGCGTGC GTGCCTCCGA CTCCGGGGAC
ACCACCCGGG TGGTCTTCGA TCTGGGCGGG GCGGTGGAGC ACAAGGCCTT CACCCTGGCC
GATCCCCATC GGGTGGTGAT CGACATCCGC GGCGCCCGGG CCGCCAGTGA CCTGACCCTG
ACCGGGCAGG GCGTGGTCGA GCGCCTGCGC TCGGGCGCCC GGGGTGATGG CGACCTGCGC
CTGGTGCTGG ACCTTACCGA ACAGGTGCGC CCGCGCACCT TCCTGGTGGC CCCCGGCAAC
GGTCGCGGAC ACCGGCTGGT GGTGGACCTC GAGCCCCACG GTCGGCGCGA TGCCGAGTCC
GCCGGGCGCT CGGCCGATTC CCAAAGCCGT TCCGGAGCCC GTGCCGAGCC CACCCGTTCG
GTGGGCAACG GTACGCGCCA GCGGGACCTG GTGGTGGCCA TCGATGCGGG CCACGGCGGG
GTGGATCCGG GCGCCATCGG CCCCGGCGGC ACCTTCGAAA AGGACATCGC CCTCCAGGTC
GCACGGCGGC TGGCCCGGCT GCTGGAGGAC AAGCCCGGTC TCCGGCCGCT GATGATCCGC
GATGGCGATT ACTACATGGG GTTGCGTGAC CGGACCCGAA AGGCGCGCGA GAACAACGCC
GATCTGTTCG TCTCCATCCA TGCCGATGCC CTGGATGATC GCCGGGTGCG CGGCAGCTCC
GTCTACGTGC TCTCCGAGCA GGGCGCCACC TCGGAGGCGG CGCGCATGCT GGCGCAGCGT
GAGAACGCCG CCGACTTTAT CGGCGGCGTC TCGCTCAAGG ACAAGGACGA CATGGTCGCC
TCGGTGCTGG TGGATCTCTC CCGCGCAGCC ACGGTCGAGT CCAGCCTGGA GCTGGGTGAC
AAGGCCCTGG AGGAACTGGG CCGGACCAAC CGCCTGTTGC GCGGCCGGGT TGAGCAGGCG
GGCTTCGCCG TGCTCAAGAG TCTGGATATG CCCTCCATGC TGGTGGAGCT GGGCTTTATC
TCCAACCCCG AGGAGGAGCG CCTGCTCAGG CAGGCTGAAC ACCAGCAGAA CCTGGCCCGG
GCCCTGGCGC GGTCCATCGA GCGCTACGCC GAGGACGTCA TGCTGCCCGA GCTGCGTATG
GCCGGGGACG AGGCCGGGGG GCAGGAGTAC GTGGTCCGTC GCGGCGATAC CCTCAGCGCC
ATTGCCCAAC GGCACGACGT CAGCGTCGGC CGGCTGCGCG CCGCCAATGA TCTCAACGGC
GACAACATCG TGGTGGGCCG TACCCTGGTG ATACCATAG
 
Protein sequence
MSLPNPLQWS IIIGLLLLCH SALLSAQTEV SGVRASDSGD TTRVVFDLGG AVEHKAFTLA 
DPHRVVIDIR GARAASDLTL TGQGVVERLR SGARGDGDLR LVLDLTEQVR PRTFLVAPGN
GRGHRLVVDL EPHGRRDAES AGRSADSQSR SGARAEPTRS VGNGTRQRDL VVAIDAGHGG
VDPGAIGPGG TFEKDIALQV ARRLARLLED KPGLRPLMIR DGDYYMGLRD RTRKARENNA
DLFVSIHADA LDDRRVRGSS VYVLSEQGAT SEAARMLAQR ENAADFIGGV SLKDKDDMVA
SVLVDLSRAA TVESSLELGD KALEELGRTN RLLRGRVEQA GFAVLKSLDM PSMLVELGFI
SNPEEERLLR QAEHQQNLAR ALARSIERYA EDVMLPELRM AGDEAGGQEY VVRRGDTLSA
IAQRHDVSVG RLRAANDLNG DNIVVGRTLV IP