| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0551 |
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| Symbol | |
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| ID | 4270306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 598468 |
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| End bp | 600021 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638125292 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_741395 |
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| Protein GI | 114319712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.235647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000444348 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAGA AAGAAAGACT CATCATCTTC GACACCACGT TGCGCGACGG CGAGCAGAGC
CCCGGCGCCT CCATGACCCG CGAGGAGAAG GTGCGCATCG GCCGTGCCCT GGAGCGACTG
AAGGTGGATG TCATCGAGGC CGGTTTCCCC GCCGCCAGCG AAGGCGACTT CGAGTCGGTC
CGCGCCGTCG CCCGTGCGGT ACGGGGCAGC CGTATCTGCG GCCTGGCGCG CGCCCGCGAG
GACGATATCC GGCGGGCCGG TGAGGCGCTG CAGGAGGCCG AGGCCGGGCG TATCCACACC
TTCCTGGCCA CCTCGCCCAT CCACATGGAG AAGAAGCTGC GGATGACCCC CGACGAGGTG
GTGGATGCCG CCGTCCGGGC GGTGAAGCTG GCCCGCTCCC TTTGCGACGA TGTGGAGTTC
TCGCCGGAGG ACGCCGGGCG TTCCGATCCG GAGTTCCTCT GCCGGGTCAT TGAGGCGGTG
ATCGACGCTG GCGCCGGCAC CGTGAACATC CCCGATACGG TGGGCTACAA CCTGCCCGAG
CAATTCGGCG GGTTGATCGG GCGGCTGCGC GAGCGGGTGC CCAACTCCGA CAAGGCGGTC
TTCTCGGTGC ACTGCCACAA CGATCTGGGG GTGGCGGTGG CCAACTCCCT GGCCGCGGTG
ATGAACGGGG CCCGACAGGT GGAGTGCACC ATCAACGGCC TGGGCGAGCG GGCCGGCAAC
GCCGCACTGG AGGAGGTGGT CATGGCGGTG CGCACCCGGC AGGACTTCTT CCCCTGCGAC
ACCGGGATCG ATGCCCACGA GATCGTCCCT GCCAGCCGCC TGGTGGCCAA TATCACCGGT
TTCCAGCCCC AGCCGAACAA GGCCATCGTG GGCGCCAACG CCTTCGCCCA CGAGTCGGGC
ATCCACCAGG ACGGGGTGCT CAAGCACCGC GAGACCTACG AGATCATGCG CGCCGAGGAC
GTGGGCTGGC ACACCAACCG CATGGTGCTG GGCAAGCACT CGGGCCGCAA CGCCTTCCGC
GCCCGGCTCA AGGATCTGGG CATCGAGTTT GAGTCGGAGG AGCAGCTTAA CGAGGCCTTT
CAGCGCTTCA AGGGGCTGGC GGACAAGAAG CACGAGATCT TCGACGAGGA CCTGCAGGCG
CTGGTCACCG AGGCCAACCT GGAGCTGGAG AACGAGCGTT ACCGGCTGCT CGCGCTGCGG
GTCTGCTCCG AGACCGGGGA GACCCCGGAG GCGATTGTCA CCCTGGCGGT GGACGGCCAC
GAGCGCAGGG CGGTCTGTCC GGGCAGTGGT CCGGTAGATG CCGCCTTCAA GGCCATTGAG
GAGCTGGTCG GGGCGGCGGA TACCGAGCTG TTGCTCTACT CGGTGAGCAA TATCACCACC
GGGACCGACT CCCAGGGCGA GGTGACCGTG CGCCTGGAAC GGGGTGGGCG GATCGTCAAC
GGGCAAGGCT CGGACACCGA CATCGTCATC GCCTCGGCCA AGGCCTACCT GAACGCCCTG
AACAAGATCG ACCAGGGTGA GCTGCGGCGC CACCCGCAGG CGGCGGACGT TTAG
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| Protein sequence | MSEKERLIIF DTTLRDGEQS PGASMTREEK VRIGRALERL KVDVIEAGFP AASEGDFESV
RAVARAVRGS RICGLARARE DDIRRAGEAL QEAEAGRIHT FLATSPIHME KKLRMTPDEV
VDAAVRAVKL ARSLCDDVEF SPEDAGRSDP EFLCRVIEAV IDAGAGTVNI PDTVGYNLPE
QFGGLIGRLR ERVPNSDKAV FSVHCHNDLG VAVANSLAAV MNGARQVECT INGLGERAGN
AALEEVVMAV RTRQDFFPCD TGIDAHEIVP ASRLVANITG FQPQPNKAIV GANAFAHESG
IHQDGVLKHR ETYEIMRAED VGWHTNRMVL GKHSGRNAFR ARLKDLGIEF ESEEQLNEAF
QRFKGLADKK HEIFDEDLQA LVTEANLELE NERYRLLALR VCSETGETPE AIVTLAVDGH
ERRAVCPGSG PVDAAFKAIE ELVGAADTEL LLYSVSNITT GTDSQGEVTV RLERGGRIVN
GQGSDTDIVI ASAKAYLNAL NKIDQGELRR HPQAADV
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