Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0542 |
Symbol | |
ID | 4268071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 590079 |
End bp | 591404 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638125283 |
Product | membrane protein |
Protein accession | YP_741386 |
Protein GI | 114319703 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00215324 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCGCGAC AGGGAGGGGC CCGCCCCGGG CCACAGCCGC CAGCAATGGA AGAACTCACC GAGCAGTTCA TCGCCGGCAA CGAAACCATC CTGCAGTTGG CTGTGGCACT GCTGCTGGGC GCGCTCATCG GTCTGGAGCG CGGTTGGGAA TCGCGGGAGC TGGCCGCCGG GCGCCGGGTG GCAGGGATCC GCACCTATGC CCTGCTCGGG CTGTTGGGTG GCCTGTCGGC GGTGCTTTCC GAGGCCCTCA GCCCCTGGGC CTTCCCGGTG ATGCTGATCG GCGTGGCGGC GCTGACGCTG GTGGCCTACC GCACCCAGGC GGAGCAGGAG CGCAACGTCA GTATCACCGG CGCGGTGGGC CAGATACTCA CCTTCTCGTT CGGGGCGATC GCGGTGGCGG TGGACATGGT GGTGGCCACC GCGGGCGCAG TGGTCACGGT GCTGATCCTG GACAACAAGC GGGAGATCCA CGGCCTGATC AACCAGCTTC ATGCCCATGA GCTGGACGCG GCCTTCAAGC TGCTGTTGAT CTCCGTGGTC ATGCTGCCCC TGCTGCCGGA CGAGGGCATG GGCCCCGGCA GGGCCATCAA CCCTTACGAG ATCTGGTGGC TGGTGGTGTT GATCGCCTCG GTCTCCTTCG TCGGCTACTT CGCCGTCCGG GTCGGCGGCA CCGAGAAGGG GATCCTGTTC ACCAGCCTGT TCGCGGGGCT GAGCTCCTCC ACCGCGCTGA CCCTGCACTT CTCCCGACAG TCGCGCCAGG CCGCCGAACT CAGCCCACTG CTGGCCGCCG GCATCCTCAT CGCCTGCGGC ACCATGTTCC CGCGCATCCT GCTCTATGCG CTGATCATCA ATCCGGCACT GATCCCGGCG CTGGTGCTGC CGGTCATCGT CATGGCCACC CTGCTCTACC TGCCCGCGCT GGTCATCTGG CACCGGCAAC GCCGGCGCCA GGACGTGGCC CAGCCGACCC TAAAACAGAA CCCGCTGGAT CTGAAGTCGG CGTTGATGTT CGGTGCCTTG CTCACCGCCA TCATGTTCCT CGGTGAATGG CTGCGGGAAT GGCTGGGGGA CGCCGGCATC TATCTGCTGG CCGCCTCCTC CGGGGTGGCG GACGTGGACG CCATCACGTT GTCGTTGACC CGGATGTCCA ACGTCTCCAT CACCCTGGAC ACGGCGGTGA TGGGCATCGT CATCGCCGCC TCGGTGAACA ACCTGATCAA GGGCGGCCTG GCCGCGGTGA TCGGCACCGG CGCGCTGGGC AAACGGGTCA CCGGTCCCAT GCTGTTGTCG CTGGCCGCCG GGCTGGCCGT GGCTTGGTGG CAATAG
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Protein sequence | MPRQGGARPG PQPPAMEELT EQFIAGNETI LQLAVALLLG ALIGLERGWE SRELAAGRRV AGIRTYALLG LLGGLSAVLS EALSPWAFPV MLIGVAALTL VAYRTQAEQE RNVSITGAVG QILTFSFGAI AVAVDMVVAT AGAVVTVLIL DNKREIHGLI NQLHAHELDA AFKLLLISVV MLPLLPDEGM GPGRAINPYE IWWLVVLIAS VSFVGYFAVR VGGTEKGILF TSLFAGLSSS TALTLHFSRQ SRQAAELSPL LAAGILIACG TMFPRILLYA LIINPALIPA LVLPVIVMAT LLYLPALVIW HRQRRRQDVA QPTLKQNPLD LKSALMFGAL LTAIMFLGEW LREWLGDAGI YLLAASSGVA DVDAITLSLT RMSNVSITLD TAVMGIVIAA SVNNLIKGGL AAVIGTGALG KRVTGPMLLS LAAGLAVAWW Q
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