| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0540 |
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| Symbol | |
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| ID | 4268069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 587496 |
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| End bp | 589577 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638125281 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_741384 |
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| Protein GI | 114319701 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00344022 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGGCG ATCTTCAGGC ATCGGACCTA CTCTGCAGCC ACTGGATCGA GGTGGCCGCC
ATCCAGCGTT ACCGCGATGT GGTGCGTGAT GGTAAAGAGC CGGTGCGCGC CTTCGCGGTG
CTGAACGAGG ACGGGCGCTT CATGGGGCTG GTGGAGGAGC GCCAGGCCGC CCTCTTCCCC
GGCCGCATCT TCGCCGACCT GCTGGTCAAA CGCCCCCCAG AACCGGTAGC CGCCGACGCC
GCGGTGCGAG ACGTGCTGAA TGCGCTGGAC CGCGCCCCCA CCCTGCACCT GCCGGTGGTG
GATGAGCGGG GCGAGTGTAT TGGCGTCACC TCGCACACCT GTCTCTTTTC CGTGCTGTTG
TCCCGCGAAC AAGCGCTGCG CCGCGAGCGC GAATCGCTCA TCCTGCAACT GCAGGATGAG
CTCCACGCCC ACGAGATCGC CAGCGCGGTC TTCAACGCCA CCTCCGAGGG GATCATGGTG
ACGGACGCGG AACAGCGCAT CATCTCCGTC AACCGTGCCT TTGTGAACAC CACCGGCTAT
GAACCCCGGG AGGCCCTGGG CCAGAGCCCC AGCATCCTCT CCTCCGGACG CCACAGCGCT
GACTTCTACG CGGACATGTG GGAACAGCTT CGGGAGCACG GGACCTGGGA GGGGGAGATC
TGGAACCGGC GCAAGAACGG CGAGGTCTAC CCGGAGTGGC TCCACGTGGA TGCCATCCGC
GACGAGGCCG GACGGATCAC GAATTACGTC GGGGTCTTCT CCGACATCAC CAAGCACAAG
GAGCTGCACG ATCGGCTGCA TGCATTGGCC AATTACGACA GCCTGACCGG ACTACCCAAC
CGGACTCTGT TCCTTGATCG CCTCCGGCAG ATCATCGCCC TGGCCGAACA CCGCGGGTTC
TCCTTCTCCC TCCTCTACCT GGGCCTGGAC CGGTTCAAGG AGATCAACGA CACCTACAGC
CACACTGCCG GCGATCAGGT GCTGGTGGAG GTCGGCCAGC GGCTGCAGAC CTGCCTGCGG
GAGAAAGACG ACCTGGCACG CATGGGCGGC GATGAATTCG TCATCCTCGT GGAGGGCGAA
GAGCTCAACG TCCACACCGT GGCCCAACGC CTGCTGCGCA CCCTGGAAAA CCCGATCCTG
ATCGACCAAG AGCCCTTCTT TGTCTCCGCC AGCATCGGCA TCTGCCACTA CCCCGACGAC
GGCGCGGACA CGGATACGCT GATGGCGACG GCCCAATCGG CCCTCTACCA GGCGAAGGCC
GCCGGCCAGG GCGGCTTCAG TCTCTACTCA CCCGACGCCC ATGAACGCGC CCGACAGCGG
GTGCGCCTGG TCTCGGACCT GCGCGAGGCG CTGGAGCACA ACAGGCTCGA ACTGGCCTGG
CAACCCCAGT TCGGTCTCGA CAACCGCCGG GTGACCGGCT TCGAGGCCCT GGCCCGCTGG
CAGCGGGACG ATGGGCGCCC GATCAGCCCC GCCGAATTCA TCCCGCTGGC GGAGCAGTCG
GGGCTGATCG CGCAACTGGG GCGATGGGTG ATCGACACCG CAACCGCTGA GGCCAAGGCG
CTGCTGCAGG CCCGGCCGGA GCTGGAGCAG GCCCGCTTTG CGCTCAACCT GTCCCCCTAC
CAGCTTGATG ACTCCCTGCC GAAGATCCTG ACCGATGGCC TGGCCGCCGC CGGTCTCCCG
GCCGGCGCCC TGGAGGTGGA GATCACCGAA TCCGCGCTCT TCGCCGACCA GGAAAGGGTG
ACCGAAACGT TGAATGCCAT CGGCTCGACC GGAGTCCGAT TGGCGGTGGA CGACTTCGGC
ACCGGCTACT CCAACATCGC CCGGCTCAAG CTGCTGCCTA TCCACCGGCT CAAGCTGGAT
CGCTCCCTCA TCACCGACCT GGAGCACGAC CACAGCGACC GGGAGATCGT CCGGGCGCTG
CTGGCCATGG CCGAGGCCCT GGGCCTGGAC GTGGTGGCCG AGGGGGTTGA GACGCAGGCC
CAGGCCACCT TCCTGGCCCA GGCCGGCTGT CCACAGGCAC AGGGCTACCT GTACGCGCGG
CCGCAACCGC TGGAGCCGTT ACTGACCTGG CTGCGCGGAT AA
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| Protein sequence | MNGDLQASDL LCSHWIEVAA IQRYRDVVRD GKEPVRAFAV LNEDGRFMGL VEERQAALFP
GRIFADLLVK RPPEPVAADA AVRDVLNALD RAPTLHLPVV DERGECIGVT SHTCLFSVLL
SREQALRRER ESLILQLQDE LHAHEIASAV FNATSEGIMV TDAEQRIISV NRAFVNTTGY
EPREALGQSP SILSSGRHSA DFYADMWEQL REHGTWEGEI WNRRKNGEVY PEWLHVDAIR
DEAGRITNYV GVFSDITKHK ELHDRLHALA NYDSLTGLPN RTLFLDRLRQ IIALAEHRGF
SFSLLYLGLD RFKEINDTYS HTAGDQVLVE VGQRLQTCLR EKDDLARMGG DEFVILVEGE
ELNVHTVAQR LLRTLENPIL IDQEPFFVSA SIGICHYPDD GADTDTLMAT AQSALYQAKA
AGQGGFSLYS PDAHERARQR VRLVSDLREA LEHNRLELAW QPQFGLDNRR VTGFEALARW
QRDDGRPISP AEFIPLAEQS GLIAQLGRWV IDTATAEAKA LLQARPELEQ ARFALNLSPY
QLDDSLPKIL TDGLAAAGLP AGALEVEITE SALFADQERV TETLNAIGST GVRLAVDDFG
TGYSNIARLK LLPIHRLKLD RSLITDLEHD HSDREIVRAL LAMAEALGLD VVAEGVETQA
QATFLAQAGC PQAQGYLYAR PQPLEPLLTW LRG
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