Gene Mlg_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0482 
Symbol 
ID4268350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp529465 
End bp530085 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID638125222 
ProductSSU ribosomal protein S4P 
Protein accessionYP_741326 
Protein GI114319643 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGT ACATCGGTCC CACGTGTAAG CTGGCCCGCC GGGAGGGCAC TGACCTCTTC 
CTGAAGAGCG GCGTCCGGCC GCTGGACAGC AAGTGCAAGC TCGATCAGCC CCCGGGGCCC
AAGCTCCAGC GGCGCACCCG GATGTCCGAC TACGGGCTGC AGCTTCGCGA GAAGCAGAAG
GTGCGCCGGA TGTACGGCGT GCTTGAGCGG CAGTTCCGCA ACTACTACAA GGAAGCGGCC
CGGCAGAAGG GGGCCACCGG CACGGTGCTG CTGCAACTGC TGGAGAGCCG GCTGGACAAC
GTGGTGTACC GCATGGGGTT TGCCACCACC CGTGCTGAGG CGCGCCAGCT GGTGAGCCAT
CGCGGCGTGC AGGTCAACGG CCGAGTGGTC AACGTGCCGT CCATGCAGGT CAGCCCGGGC
GATCTGGTGG GCTTGAAAGA GAAGGCCCAG AAGCAGCTTC GCGTGCAGGC CGCGCTGGAG
ATGGCGCAGC AGAACGGCTG GCCCGCCTGG GTCGAGGTGG ACCCCAAGAA GTTTGAGGGC
ACCTACAAGG CCCGTCCGGA CCGTGCGGAC CTTAGCGCCG AGATCAACGA GTCGCTCATC
GTCGAGCTGT ACTCCAAGTA A
 
Protein sequence
MARYIGPTCK LARREGTDLF LKSGVRPLDS KCKLDQPPGP KLQRRTRMSD YGLQLREKQK 
VRRMYGVLER QFRNYYKEAA RQKGATGTVL LQLLESRLDN VVYRMGFATT RAEARQLVSH
RGVQVNGRVV NVPSMQVSPG DLVGLKEKAQ KQLRVQAALE MAQQNGWPAW VEVDPKKFEG
TYKARPDRAD LSAEINESLI VELYSK