Gene Mlg_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0480 
SymbolrpsM 
ID4268348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp528626 
End bp528985 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID638125220 
Product30S ribosomal protein S13 
Protein accessionYP_741324 
Protein GI114319641 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTA TTGCAGGTGT CAACATTCCC GTCCACAAGC ACGCCTGGGT GGCGCTGACC 
TCTATTTACG GCGTCGGCCG TACCCGGGCC AAGGCCATCT GCGATGAGGC AGGCGTGCCG
CGGGACCGCA AGGTCAAGGA ACTCACCGAG CAGGAGCTCG AGGCGATCCG TACCGCGCTG
GGCAAGTACG AGGTCGAGGG TGACCTGCGT CGTGCCGTGG CCATGGACAT CAAACGGCTG
ATGGATCTGG GCTGCTACCG CGGCATCCGT CACCGTCGCG GTCTGCCGGT ACGCGGTCAG
CGCACGCAGA CCAATGCCCG TACCCGTAAG GGCCCGCGTC GCGGTCCGGC AGGCAAGTAA
 
Protein sequence
MARIAGVNIP VHKHAWVALT SIYGVGRTRA KAICDEAGVP RDRKVKELTE QELEAIRTAL 
GKYEVEGDLR RAVAMDIKRL MDLGCYRGIR HRRGLPVRGQ RTQTNARTRK GPRRGPAGK