Gene Mlg_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0458 
Symbol 
ID4270392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp518196 
End bp518852 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID638125198 
Product50S ribosomal protein L3P 
Protein accessionYP_741302 
Protein GI114319619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.310193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG GAATAGTCGG CCGCAAAGCC GGCATGACGC GCGTCTTCAC TGAGGACGGG 
GCGTCGGTGC CGGTTACGGT TATTGAGGCC TCGCCCAACC GGGTCACGCA GGTGCGCACC
CCGGAGCGCG ATGGCTACAG CGGCGTGCAG GTGACCGCCG GCAGCCGCCG TCCCAACCGG
GTCAGCAAGC CCATGGCAGG GCATTTCGCC GCCGCCGGCG TCGATGCCGG TCGCGGTGTC
TGGGAGTTCC GCGTCAGCGA CGGTCAGGCC ATTGAGCTTG AGGCCGGCAA AGAGCTGACC
GTGGAGACCT TCGAGGCCGG TCAGGTGGTG GACATCACCG GCACCAGCAA GGGCAAGGGC
TTCGCCGGCA CCGTCAAGCG GCACAACTTC CGCACCCAGG ACGCGACCCA CGGCAACTCC
CTGGCGCACC GGGCCCCGGG CTCCATCGGT CAGAACCAGA CCCCCGGCCG GGTGTTCAAG
GGCAAGAAGA TGGCCGGCCA GATGGGTAAC AAGCGCAGCA CCGTCAAGAA TCTCGAGGTG
GTGCGCGTGG ATGCCGAGCG CCATCTCCTC CTGGTGCGCG GCTCGGTGCC CGGCGCGGTG
GGCAGTGATG TCATCGTGCG CCCCGCGCGC AACCAGCGAA AGAAGGGGGA TAGCTGA
 
Protein sequence
MSIGIVGRKA GMTRVFTEDG ASVPVTVIEA SPNRVTQVRT PERDGYSGVQ VTAGSRRPNR 
VSKPMAGHFA AAGVDAGRGV WEFRVSDGQA IELEAGKELT VETFEAGQVV DITGTSKGKG
FAGTVKRHNF RTQDATHGNS LAHRAPGSIG QNQTPGRVFK GKKMAGQMGN KRSTVKNLEV
VRVDAERHLL LVRGSVPGAV GSDVIVRPAR NQRKKGDS