| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0413 |
|---|
| Symbol | |
|---|
| ID | 4269452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 462504 |
|---|
| End bp | 463862 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638125143 |
|---|
| Product | microcin-processing peptidase 1 |
|---|
| Protein accession | YP_741257 |
|---|
| Protein GI | 114319574 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0570132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.116989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA CCGTCACGCA CAGCAGTCGT ACCTCAGGCC TCCCCGCCAG CGCCGACATG
GAGGCCCTCA TCCAACAGGC CCTGGACACC GCCCGCACCC TGGGCGCCAC CGGCGCCGAG
GCCGGCCTCG CCTTCGATCT CGGCCTCTCC GTCAACGTCC GCAAGGGCGA AGTCGACACC
TTGGAACACC ACCGGGACCG CGGCCTCAGC GTCACCGTCT ACTTCGGCCA GCGCAAGGGC
AGCGCCAACA CCGCCGACTT CCGCCCCGAA TCCATCCGCG AGACCGTCCA GGCCGCCTGC
GACATCGCCC GCTACACCTC CGAGGACCCC GCCCACGGCC TCGCCGACCC CGAACTCATG
CCCCGCCAGG TCCCCGAGCT GGACCTGGAA CACCCCTGGG CCCTGAACCC GGAAGAGGCC
ATCGACCTCG CCCGCCGCTG CGAAGCCGCC GGGCTGGCGG AAAAAGGCAT CACCAACTCC
GAGGGCGCGG GCGTGGCCAC CCACCACACC CTCCGGGTCT ACGGCAACAG CCACGGCTTC
CTCGGCCACT ACGCCGGCAC CCGCCACAGC ATGAACTGCG TCATGGTCGC CGGCGAGGGC
GACCACATGC AGCGGGACTA CTGGTACACC GTCGACCGCG TCCCCGAGGC CCTGGAACGG
GCCGAGGACG TCGGTCGCGA GGCGGCCCGG CGCACCCTGG CGCGAATGGG CGCCCGCCAA
CTGGGCACCC GGCGGGTGCC GGTCCTGTTC GCCCCGCCCA TGGCCCGGGG ACTCATCGGC
CACTTTATCG GCGCCATTCG CGGCGGCGCC CTCTACCGCA AGGCCTCCTT CCTGCTCGAC
CAGTTGGGCC AGCCGGTCTT CCCGGACTTC GTGCAGATGC GGGAAGAGCC CCACCGCCCG
CGTGGCCTGG GCAGCGTGCC CTTCGACCAT GAGGGCGTGG CCACCCGCGA GCGGACATTG
GTGCGCGACG GCGTGCTGCA GGGCTACGTG CTGGACAGCT ACTCCGCCCG CCGCCTGGGC
ATGCAGACCA CCGGCAACGC CGGCGGCGTG CACAACCTGG TGGTGGAACC AGGCCCCGAC
GACCAGGCCG CCCTGCTCAA GCGCATGGGG ACCGGGCTAC TGGTCACGGA GATGATGGGG
CAGGGGGTTA ACCCGGTCAC CGGCGACTAC TCGCGGGGGG CTACCGGCTT CTGGGTCGAG
GATGGCGAGA TCGCCCACCC GGTGCAGGAG ATCACCGTGG CCGGCAATCT GCGGGAGATG
TACGCCGGAC TCACCGCGGT GGGTTGCGAC GTGGACCGGC GCGGCAACAT CCACACCGGC
TCGCTGCTGG TGGATGCGAT GACCGTCGCC GGCGAATGA
|
|---|
| Protein sequence | MTNTVTHSSR TSGLPASADM EALIQQALDT ARTLGATGAE AGLAFDLGLS VNVRKGEVDT
LEHHRDRGLS VTVYFGQRKG SANTADFRPE SIRETVQAAC DIARYTSEDP AHGLADPELM
PRQVPELDLE HPWALNPEEA IDLARRCEAA GLAEKGITNS EGAGVATHHT LRVYGNSHGF
LGHYAGTRHS MNCVMVAGEG DHMQRDYWYT VDRVPEALER AEDVGREAAR RTLARMGARQ
LGTRRVPVLF APPMARGLIG HFIGAIRGGA LYRKASFLLD QLGQPVFPDF VQMREEPHRP
RGLGSVPFDH EGVATRERTL VRDGVLQGYV LDSYSARRLG MQTTGNAGGV HNLVVEPGPD
DQAALLKRMG TGLLVTEMMG QGVNPVTGDY SRGATGFWVE DGEIAHPVQE ITVAGNLREM
YAGLTAVGCD VDRRGNIHTG SLLVDAMTVA GE
|
|---|
| |