Gene Mlg_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0365 
Symbol 
ID4268956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp410724 
End bp411383 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID638125096 
Producthypothetical protein 
Protein accessionYP_741210 
Protein GI114319527 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.213957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.529008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGTGC GCCGGATTTG CTTGCTGTTG CTCCTGTTAC TCACCGCCCT GCCCCTGACC 
GCCCATGCCC AGGTCTACGT CAGCGATCAG CTCGAGGTGG CCAAGCGCAG CGGCCCGAGC
ATGCAGCACC GCATCCTGCG CTTCGTAAGC TCCGGCACGC AGTTGCAGCA GCTGGACAGC
AGCGGTGACT GGACCCAGGT GCGCGACGGC CAGGGCCGTG AGGGCTGGAT CGAGACCCGG
CACCTGATGA ACGAGCCCAG CGCCCGGCAG CGGCTGGAGG CGGCCAACCG CCGGGTGGAA
GCGGCCGAGG AGGCGCGCGA GGAGATGGCG GCGCAACTGG CCGAGACCCG CGAGCACGCC
GACGAGCTGG CCGAACGGGT GGCGGCGCTG GAGAGCGAGC GCGACCGCCT GGAGGCCCGC
CTGGAGGATG CCCGCGAGGG CCTTGAGCTG GCCGACGAAC ACCAGCGCCT GCAGACCACC
ATCAGCGATC TGCAGGCGGA GATCCGTGAA CTGGAGGCGG ACAAGACCGC CCTCGCCCGC
CAGACCCAGC GCGACTGGTT CCTGGCCGGG GCCGGCGTGC TGCTGGTGGG GCTCATTCTC
GGCCTTATCC TGCCGCGGAT CCGCTGGAAG CGCCGCCGTG GCTGGGGTGA TACCCTGTAA
 
Protein sequence
MPVRRICLLL LLLLTALPLT AHAQVYVSDQ LEVAKRSGPS MQHRILRFVS SGTQLQQLDS 
SGDWTQVRDG QGREGWIETR HLMNEPSARQ RLEAANRRVE AAEEAREEMA AQLAETREHA
DELAERVAAL ESERDRLEAR LEDAREGLEL ADEHQRLQTT ISDLQAEIRE LEADKTALAR
QTQRDWFLAG AGVLLVGLIL GLILPRIRWK RRRGWGDTL