| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0346 |
|---|
| Symbol | pyrB |
|---|
| ID | 4268334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 389845 |
|---|
| End bp | 390810 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638125077 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_741191 |
|---|
| Protein GI | 114319508 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.419246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC AGTTGGACAA CCAGGGCCGG TTGCGCCACT TCCTGACCAC GGAAGGCCTG
CCCCGGCCGC TGCTGAACCA GATCCTCGAC ACCGCCGAGA GCTTCACCGG CGTCATCGGC
AAGTCGGTCA AGAAGGTCCC GCTGCTGCGC GGCCGCACGG TCATCAACCT GTTTTTCGAG
CCGAGCACGC GAACCCGCAC CACCTTCGAG TTGGCCGCCA CCCGGCTGTC GGCGGACGTG
CTCAACATCG ACGTGGCGGT CTCCTCCCAG TCCAAGGGCG AGAGCCTTCT GGACATGCTG
CGCAACCTGG AGGCCATGCA GTGCGACGCC TTCGTGGTGC GCCACGGCGA CAGCGGCACC
GCCGAGTTTA TCGCCCGCCA CGTCCGGCCC GGGGTGAGCG TGCTGAACGC CGGCGACGGC
CGCCACGCCC ACCCCACCCA GGCCATGCTG GACATGTTCA CCATCCGCCA GCACAAGGGC
GATTTCGAAC CGCTGCGGGT GGCCATTGTC GGCGACATCC TGCACTCGCG GGTGGCCCGC
TCCCAGATTC ACGCCCTCAA TGGCCTGGGC GCCGGCGAGG TCCGGGTGAT CGCCCCGCGC
ACCCTGCTGC CACGGGATGT GGAGACCCTG GGCGTGCGGG TGTTCCACGA CATGCAGGCC
GGGCTCCGCG ATGTCGACGT GGTGATGATG CTCCGGCTGC AACGGGAGCG CATGCGCGGC
GCCCTGCTGC CCAGTGAGGG CGAGTACTTC AAGCTTTACG GCCTGACCGA GGAGAAACTC
TCGGTGGCTC ACCCGGACGC CATCATCATG CATCCCGGTC CCATCAACCG CGGTGTGGAG
ATGAACTCGG CGGTGGCCGA CGGGCCGCGT TCAGTCATCC TGCAACAGGT CACCAACGGG
ATCGCCGTGC GCATGGCGCT GATGTCCATG CTGCTCGGCC GGGCCGGCGG AGGGGAGGAC
GCATGA
|
|---|
| Protein sequence | MNAQLDNQGR LRHFLTTEGL PRPLLNQILD TAESFTGVIG KSVKKVPLLR GRTVINLFFE
PSTRTRTTFE LAATRLSADV LNIDVAVSSQ SKGESLLDML RNLEAMQCDA FVVRHGDSGT
AEFIARHVRP GVSVLNAGDG RHAHPTQAML DMFTIRQHKG DFEPLRVAIV GDILHSRVAR
SQIHALNGLG AGEVRVIAPR TLLPRDVETL GVRVFHDMQA GLRDVDVVMM LRLQRERMRG
ALLPSEGEYF KLYGLTEEKL SVAHPDAIIM HPGPINRGVE MNSAVADGPR SVILQQVTNG
IAVRMALMSM LLGRAGGGED A
|
|---|
| |