| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0335 |
|---|
| Symbol | |
|---|
| ID | 4269898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 379529 |
|---|
| End bp | 380452 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638125066 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_741180 |
|---|
| Protein GI | 114319497 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT GGCTCATCAC CCACCCGGCC TGCCTGGAGC ACGATACCGG CCCAGGGCAC
CCGGAAAGCA TCGCCCGACT GCAGACCATC CTGACAGCGC TGCAGTCGTC CACCTTCGAG
TTCCTGATCC GTGAGCCGGC GCCGCGCGCC GAGGTGGAAC AGCTCAACCG GGTACACGAC
CCGGACTACG TGCGCGACAT CCTCGCCCGG ATCCCCGAAC AGGGCCAGGC CTTCATCGAC
AGCGACACCG TGGTCTGCCC GGCCACCGGC GAGGCGGCGC TGCGGGCGGC CGGGGCCGTC
TGCCATGCGG TGGATGCGGT GGTCGGCGGC CAGGCGCAGA ACGCCTTTTG CGCGGTGCGC
CCGCCCGGCC ACCACGCCGA ACCCAACCAG GCGATGGGCT TTTGTTTCTT CAATAACATC
GCCGTGGGCG CGGCCCACGC TATCGCGGCG CACGGCCTGG AGCGGGTGGC GATCATGGAC
TTCGATGTCC ACCATGGCAA TGGCACCCAG ACCATAGCTG AGCGCAACCC GAAGATGTAC
TACCTCTCCA CCCACCAGGC ACCGCTGTTC CCGGGTACCG GCGATCCCTC CGAAACCGGT
CAGGGCAACA TCCGCAACGC GACCCTGGAG GATGGTGACG GCTCCGAGAT GTTCCGCTTC
CAGTTCGAGG AACGCATCCT GCCGGAGCTG CACCGGTACA AGCCGCAGCT GGTGATGATC
TCCGCCGGCT TCGACGCCCA CCGCTCCGAC CCCCTGGCCA CCCTGCGGCT GGACGAAACC
GACTTTGCCT GGGCCACAAG GGAGCTGGTG GCCATCGCCC GCAAGTACTG TGACGGCAAG
GTGGTCTCGG CGCTGGAGGG GGGGTACAGC CTGAACGCGG TGGGCCGTTG CGCCCGCGCC
CATGTGGAAG CACTGATGAC CTGA
|
|---|
| Protein sequence | MTTWLITHPA CLEHDTGPGH PESIARLQTI LTALQSSTFE FLIREPAPRA EVEQLNRVHD
PDYVRDILAR IPEQGQAFID SDTVVCPATG EAALRAAGAV CHAVDAVVGG QAQNAFCAVR
PPGHHAEPNQ AMGFCFFNNI AVGAAHAIAA HGLERVAIMD FDVHHGNGTQ TIAERNPKMY
YLSTHQAPLF PGTGDPSETG QGNIRNATLE DGDGSEMFRF QFEERILPEL HRYKPQLVMI
SAGFDAHRSD PLATLRLDET DFAWATRELV AIARKYCDGK VVSALEGGYS LNAVGRCARA
HVEALMT
|
|---|
| |