Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0309 |
Symbol | |
ID | 4270769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 350247 |
End bp | 351905 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638125035 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_741154 |
Protein GI | 114319471 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.670789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAC AGGCGAAATC CGGATTGCTC AAGGGGATGA ACCCAACGGT CACCGTGGTG ACGGTGGTGG TCATGCTGGT CTCGGTCATC CTCGGCGCCG GCTGGACGGA GCAATCCGCC GCTGCCATCA GCACGGCGCG TGAGACCCTG AACCCCTTCC TGGAATGGTA CTACGTGGTG CTGGTGGCGG TGTTCTTCGT CTTTTGCCTG TGGCTGGGCG TGGGCCGGTA CAAGAATGTG CGCCTGGGTG GCGATACCGA GCGGCCGGAG TTCACCACCT TCTCCTGGGT GGCCATGCTG TTTGCGGCCG GAACGGGGGT GGGGATCATC TTCTGGAGCA TCGCCGAGCC CATCATGCAC TTCGACTCCA ACCCCTTCGC TGCCGACGGC AGCCCCGAGT CGGCGGCAGT GGCTATGCGC CTGACCTTCT TTCACTGGGG GCTCCCGGGG TGGGCGATCT TCGGGCTGGT GGGGCTGGTG CTGGCCTATT TCAGTTTCCG TCACAGCCTG CCGTTGACCG TCCGCTCGGC CCTCTACCCC TTCCTGGGGC ACCGTATCCA CGGCCCGATC GGTGATCTGG TGGACAGCCT GGCGGTGTTC GGCACGGTCT TCGGCATCGC GACGACCCTG GGGTTGGGGG TGCAGCAGAT GAACACCGGA CTGGGCCAGC TCTTCGGACT GGACACCACG CTCACCCTGC AACTGGGGGT CACCGCGGTG ATCATGTTCA TCGCCACGGC GTCGGTGGTC TCCGGGGTGA AGCGCGGGGT TCGGCTGCTC TCCGAGGCCA ACTTCTGGCT GAGTGTGGTC ATTGTGCTCT TTTTCCTGAT CTTCGGCCCC ACCCACTACC TGTTTGCGCT GACCATCGAG TCCACCGGCG AGTACCTGCA GAACCTGCTG GCCATGACCT TCTACACCCA CGCCAACAAG GACACCGGCT GGCAGGCGGA GTGGACAGTC TTCTTCTGGG GCTGGTGGAT TGCCTGGTCG CCCTTCGTGG GCATGTTCAT CGCCCGCATC TCCCGCGGGC GCACGGTGCG CGAGTTCATG CTCGGGGTGC TGCTGATGCC CACGGTGATC ACCTTCGTCT GGATCGGGCT GTTCGGCGGC ACCGCCCTGC ACCAGGAGCT GTTCGGCGAC GGTGGCGTGG TTGCGGCGGT GAGTCAGGAT GTCTCGGTGG CCATCTTCCA CACCATCGAG GGGATGCAAT TGGGCCTTCT GGGGCAGGCG GCGGGGGTGC TGGTCACGGT CCTGATCGCC ACCTATCTGA TCACCTCCGC CAATGCCGGC ACCCTGGTCA TCAACACGCT CCTGGCCAAT GGGGACACCG ATCCGCCCAC CGGGCACCGG ATCCTCTGGG GCGTGGTGCT GGCCCTGCTG ACGGCGGTGC TCCTGGTGGC CGGTGGGCTG GAGACGCTGC AGGCGGCGGT CATTCTGGCG GGGCTGCCCT TTTCGTTAGT GATGGTGGCG ATGCTGCTCG GTTTGGTGAA GGCCCTGGAG CAGGAGCGCT ACGCACCGCG TCCCGGTGCC CGTACGCTGG CGCCGACCGA ACCCTGGGTG GGCATGGACC AGGCCGGCGA TACCCTGCAC GAGCCCCGCG GCACGGCCGG GGCGGCCGGG GAGTACCAGC CCAGTGCCCG GACCGGCGCC GAGGGCTAG
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Protein sequence | MAVQAKSGLL KGMNPTVTVV TVVVMLVSVI LGAGWTEQSA AAISTARETL NPFLEWYYVV LVAVFFVFCL WLGVGRYKNV RLGGDTERPE FTTFSWVAML FAAGTGVGII FWSIAEPIMH FDSNPFAADG SPESAAVAMR LTFFHWGLPG WAIFGLVGLV LAYFSFRHSL PLTVRSALYP FLGHRIHGPI GDLVDSLAVF GTVFGIATTL GLGVQQMNTG LGQLFGLDTT LTLQLGVTAV IMFIATASVV SGVKRGVRLL SEANFWLSVV IVLFFLIFGP THYLFALTIE STGEYLQNLL AMTFYTHANK DTGWQAEWTV FFWGWWIAWS PFVGMFIARI SRGRTVREFM LGVLLMPTVI TFVWIGLFGG TALHQELFGD GGVVAAVSQD VSVAIFHTIE GMQLGLLGQA AGVLVTVLIA TYLITSANAG TLVINTLLAN GDTDPPTGHR ILWGVVLALL TAVLLVAGGL ETLQAAVILA GLPFSLVMVA MLLGLVKALE QERYAPRPGA RTLAPTEPWV GMDQAGDTLH EPRGTAGAAG EYQPSARTGA EG
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