| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0262 |
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| Symbol | |
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| ID | 4268739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 296153 |
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| End bp | 297913 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638124987 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_741107 |
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| Protein GI | 114319424 |
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| COG category | [C] Energy production and conversion
[T] Signal transduction mechanisms |
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| COG ID | [COG0538] Isocitrate dehydrogenases
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.141081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC ACATCCAATA CCCCGAGAGC GGTGAGAAAA TCACAATAAA AGACGGCAAG
CTCTCGGTGC CGGACAACCC CATCATCGGT TGTGTGGAAG GCGACGGCAT CGGCCCCGAC
ATCACCCGCG CCTGCCTGCG CATATGGGAT GCTGCGGTGG AGCACGCCTA CAAGGGCAAG
CGCAAGATCC ACTGGGCCGA GCTGTTCATG GGCGAGAAAG CCGCGGCGAA GTACGACGGC
AACTACTTCC CCGACGAGAC CAAAGAAGCC CTCAAAGACC TGCTGATCTC CATCAAAGGC
CCCCTGACCA CCCCGGTCGG CGGTGGCTTC CGCTCCCTCA ACGTCTCCCT GCGCCAGGAG
CTGGACCTGT ACGCCTGTGT GCGCCCGGTG CGCCACTACG CCGGCGTGCC CTCGCCGCTG
AAAAAGCCCG AGGACGTGGA CGTGGTGATC TTCCGTGAGA ACACCGAGGA CGTCTACGCC
GGCCTGGAGT ACCAGAGCGG CAGCGACGAG AACAAAAAGC TCGCCAAGTT CCTGCGCGAG
GAGATGGGCG CGGACTTCTT CGAGGACGCC GGCCTGGGCA TCAAGCCGAT CAGCGCCTAC
GGCTCCAAGC GCCTGGTGCG CAAGGCCATT CAGTACGCCA TCGACAACAA CCGCGAATCG
GTGACCCTGG TCCACAAGGG CAACATCATG AAGTTCACCG AAGGTGCCTT CCGCACCTGG
GGTTACGAGG TGGCGCGCGA GGAGTTTGGC GACCAGACCA TCACCGAGGA GGAGCTCTAC
TCCACCTATG GTGGTAAGCG CCCCGAGGGC AAGGTGGTCA TCAAGGACCG CATCGCCGAC
ATCATCTTCC AGCTGCTGCA GCTCCGCCCG GCCGACTTCG ACGTGCTGGC CACCATGAAC
CTCAACGGCG ACTACCTCTC CGACGCCGCC GCGGCCGAGG TGGGCGGCAT CGGCATCGCC
CCGGGTGCCA ACATGGCGGA CCACGTGGCC GTGTTCGAGG CCACCCACGG CACCGCGCCC
AAGTACGCCG GCCAGGACAA GGTCAACCCC GGCTCGCTGC TCTTCTCCGG CGTTATGCTG
CTGGAGCACA TCGGCTGGCA GGAGGCCGCA GACCTGATCA CCGCCGCTTA CCAGGACGTG
GTCACCGCCC GCATCGTCAC CTACGACTTC GCCCGCCAGC TCGAGGGCGC CACCGAGGTC
AAGACCAGCC AGTTCGCCGA CGCCATCATC GACCAGATGC GCGGCAAGAT CGACGTGGCC
AAGATCCGCC GCGAGCGTGA AGAGGCCGTC GAGCGCGAGC GCAAGGCCCG CGAGCAGCGC
CGTGTGGTGG CCCCGCTGGA GGAGATGATC GCCTCCGGCC GCACGCCGCA CACCGTGGGC
GACCTGATGA ACCCCAACCC GGTCACCGTA CCCGCCGAAA CCAGCGTCGA GGACGCCATG
CACCTGATGC GCGAAAAGCG CATCTCCAGC GTGATCACCG AACCGGGCAC TGAGGGCGAG
TGGGGTATCA TGACGCAACG CGATGTGCTC AGCCGCATCG TCTCCAAGAA CCGCACGCCG
TCGACGGTGC AGGTTGAGGA GATCGCCAGC CGGCCGCTGG TCACCACCCC GGTGGACACC
AGCCTGCACG ACTGCGCCGA GATCATGTCC GAGTCCAACA TCCGCCGTAT GGTGGTCATG
GACAACAACA ACAAGCCGGT AGGCATCATC TCCGACACCG ACATCTTCGC CAGCGTGGAG
CAGTTCGGTC TGCCGGAGTA A
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| Protein sequence | MSQHIQYPES GEKITIKDGK LSVPDNPIIG CVEGDGIGPD ITRACLRIWD AAVEHAYKGK
RKIHWAELFM GEKAAAKYDG NYFPDETKEA LKDLLISIKG PLTTPVGGGF RSLNVSLRQE
LDLYACVRPV RHYAGVPSPL KKPEDVDVVI FRENTEDVYA GLEYQSGSDE NKKLAKFLRE
EMGADFFEDA GLGIKPISAY GSKRLVRKAI QYAIDNNRES VTLVHKGNIM KFTEGAFRTW
GYEVAREEFG DQTITEEELY STYGGKRPEG KVVIKDRIAD IIFQLLQLRP ADFDVLATMN
LNGDYLSDAA AAEVGGIGIA PGANMADHVA VFEATHGTAP KYAGQDKVNP GSLLFSGVML
LEHIGWQEAA DLITAAYQDV VTARIVTYDF ARQLEGATEV KTSQFADAII DQMRGKIDVA
KIRREREEAV ERERKAREQR RVVAPLEEMI ASGRTPHTVG DLMNPNPVTV PAETSVEDAM
HLMREKRISS VITEPGTEGE WGIMTQRDVL SRIVSKNRTP STVQVEEIAS RPLVTTPVDT
SLHDCAEIMS ESNIRRMVVM DNNNKPVGII SDTDIFASVE QFGLPE
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