| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0249 |
|---|
| Symbol | |
|---|
| ID | 4268726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 284503 |
|---|
| End bp | 285000 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124974 |
|---|
| Product | fimbrial protein pilin |
|---|
| Protein accession | YP_741094 |
|---|
| Protein GI | 114319411 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGGGGAG GGCATCCTCC CGCGTCATAC GCGCCCGGCG ACGGGTGGAT AGTTAAAAGT
CGACTCTACG GGAGAACGAC CATGCAAAAG CAACAGGGTT TTACTTTGAT CGAGCTGATG
ATCGTGGTGG CGATCATCGG TATTTTGGCG GCGATTGCGA TTCCGCAGTA TCAGAATTAT
GTTACTCGGT CTCAGGCATC TTCGGCGTTG AGCACGCTCT CTTCTCTGAG GACCTCATTT
GAGGAGGCTA TTCAACGAGG AGTGGACCCT TCATTTAATT CAGAGGATGC TGGTTTTATC
GGCATGGCAA GTGACGAACC GGACATCGGT ACGCTGTCTT TCAGAGCGGA CGACGGTGGT
CTTGATTTTG ACTTTAGTAC TGAGGCCACT GCTGATCTTC AAAACGGAAC ATTGTCACTC
GTAAGAACTG CACAAGGTTC TTGGAGCTGC CAGAGCGATG GTATAGAAGA CCGTTTCCTC
CCGCGGGGCT GTGACTAA
|
|---|
| Protein sequence | MRGGHPPASY APGDGWIVKS RLYGRTTMQK QQGFTLIELM IVVAIIGILA AIAIPQYQNY
VTRSQASSAL STLSSLRTSF EEAIQRGVDP SFNSEDAGFI GMASDEPDIG TLSFRADDGG
LDFDFSTEAT ADLQNGTLSL VRTAQGSWSC QSDGIEDRFL PRGCD
|
|---|
| |