Gene Mlg_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0197 
Symbol 
ID4269643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp229266 
End bp229937 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID638124921 
Productnucleotidyl transferase 
Protein accessionYP_741042 
Protein GI114319359 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0927184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA TGATCCTGGC CGCCGGGCGC GGCGAGCGCA TGCGCCCGCT CACCGACCAC 
ACCCCCAAGC CGCTGCTGCC GGTCGCCGGC CGGCCGTTGA TCGAGCATCA CCTGCGGGCA
CTGCACCGGG CCGGGGTCCG CGAGGTGGTG ATCAATACCG CCTGGCTGGG CGCCCGGATC
GAGCAGCACC TGGGTGATGG TCACCGTTTC GGCCTCCGTC TGGCCTACTC CCGCGAGCCC
GAGGGGGCAC TGGAGACCGG CGGAGGCATC CGCCAGGCAC TGCCGCTGCT GGGCGAGGCC
CCCTTCCTCG TGATCAACGG CGACATCTGG TGCGATCTTG CCCTGCAACC GCTGCTGCGC
GTCCCCCGGG GACTGGCCCA CCTGGTACTG GTGGACAACC CCGATCACAA TAGAGACGGG
GACTTCGTCC TGGCGCAGGG CCGGGTCCGC GCTGAGGGCC CCGGGCGCCG GTTGACCTAC
GCCGGCATCG GTGTCTTCCA GCCGGCCCTG TGGAACGGGA CCGCCCCGGG CGCCTTCCCG
CTGGCCCCCC TGCTGCGGCA GGCCATGGCC GCCGGTCAGG TCACCGGCGA GCATCACCGC
GGGCGCTGGC TCGATGTGGG GACGCCGGAG CGGCTGCGCA GCCTGGATGC GGAACTACAG
CACACCGATT GA
 
Protein sequence
MKAMILAAGR GERMRPLTDH TPKPLLPVAG RPLIEHHLRA LHRAGVREVV INTAWLGARI 
EQHLGDGHRF GLRLAYSREP EGALETGGGI RQALPLLGEA PFLVINGDIW CDLALQPLLR
VPRGLAHLVL VDNPDHNRDG DFVLAQGRVR AEGPGRRLTY AGIGVFQPAL WNGTAPGAFP
LAPLLRQAMA AGQVTGEHHR GRWLDVGTPE RLRSLDAELQ HTD