| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0196 |
|---|
| Symbol | |
|---|
| ID | 4269642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 227793 |
|---|
| End bp | 229226 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638124920 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_741041 |
|---|
| Protein GI | 114319358 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2170] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0710624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCAGG AGATCGACGA GACCCACTTC ACGCCGGAGC ACTTCCACCG CTTTTCCCGC
CGCCTCAAGG AGGAGACCGC CCTGCTCAAG CAGTGGCTGC AGGAGGGCCG CTTCCGGGAC
GAGCCGGCAC GCATCGGGCT GGAGCTGGAG GCCTGGCTGG TGGATGACCA GGGGTTGCCG
ACCCCACGCA ACGAGGAGGT CATCCGGCAG TGCAATGACC CGCACCTGGA GACCGAGCTG
GCGCGCTACA ACCTGGAGCT CAACACCGAT CCCGTCGCCC TGCCGGGACG GCCGTTCAGC
GAGCTGGCCG GGGTGCTGGA GCAGCGCTGG GCCCGGCTGC GCGAGGCCGC CCGGGGTCAG
CAGTGCCAGC CCACGCTGGT GGGCATCCTG CCCTCGGTGC GTGAGGCGGA TCTCTCGGTG
GCGGCCATGT CCGGCCTAAA GCGCTACCAG GCGCTGAACG AGCAGGTCCT GGCCCTGCGC
AACCGGCGCC CGATCCACCT GGACATCCGC GGCGAGGAGC ACATCACTCT GGACCACCCG
GACGTGATGC TGGAGTCCGC TGCCACCTCC CTGCAACTGC ATCTGCAGGT CAGTCCCGGC
AACGCCCACC GGCTGTTTAA CGCCGCGGTG GCCGCCTCCG CCGCCACCGT GGGCACCGCC
GCCAATTCAC CGCTGCTGTT CGACCACCTG CTCTGGGCCG AGACCCGCAT CCCGTTGTTC
GAACAGGCGG TCGCGGTGAC CCCCCTGCAC GGTGGCCATG CCGGCCCCCT GGCCCGGGTG
GGCTTCGGCA GCGGCTATGC CCGGGATGCC CTCTACGGCT GGTTTGTGGA GAACCGCCAG
CACTTCCCGG TGCTGCTGCC GGTGCTCCAG GACGCCCCGC CGGAGGACCT GGCCCACCTG
CGGCTGCACA ACGGCACCAT CTGGCGCTGG AACCGCCCGC TGGTGGAACC GCACGGCGGG
CACGACCCCC ACCTACGCAT TGAGCACCGG GTGATGGCCG CCGGGCCCAC CCTGGCCGAC
GTGGTGGCCA ACGCCGCCTT CTTCTATGGT CTGGTGCACG GGCTGCTGCT CAAGGAGCCG
GAATTGGAGG GGCGCCTGCC CTTCGTCACC GCCGAGGCCA ATTTCTACAG CGCCGCCCGC
CACGGCCTGG ACGCCACGGT CACCTGGCTG GGCCAGCGCC AGGGGCCGCT GAGGGAGCTC
ATCCTGGAGG AACTGCTGCC ACTGGCCCGG GTGGGCCTGG AGCACCAGGA CGTGGCCGGC
GACGAGATCC GCCACTGGCT GGGGCTCATC CGCGAGCGGG TGACCAGCGG CCGTACCGGG
GCCGCTTGGC AGCGCGCTTG GTGGCACCGC CACGGCCCTA ACGCCCCGGC ACTGGTACAG
GCAATGCTCC GCCACCAGCA GACCGGGGAA CCCGTCCACC GCTGGGCGCT CTAG
|
|---|
| Protein sequence | MGQEIDETHF TPEHFHRFSR RLKEETALLK QWLQEGRFRD EPARIGLELE AWLVDDQGLP
TPRNEEVIRQ CNDPHLETEL ARYNLELNTD PVALPGRPFS ELAGVLEQRW ARLREAARGQ
QCQPTLVGIL PSVREADLSV AAMSGLKRYQ ALNEQVLALR NRRPIHLDIR GEEHITLDHP
DVMLESAATS LQLHLQVSPG NAHRLFNAAV AASAATVGTA ANSPLLFDHL LWAETRIPLF
EQAVAVTPLH GGHAGPLARV GFGSGYARDA LYGWFVENRQ HFPVLLPVLQ DAPPEDLAHL
RLHNGTIWRW NRPLVEPHGG HDPHLRIEHR VMAAGPTLAD VVANAAFFYG LVHGLLLKEP
ELEGRLPFVT AEANFYSAAR HGLDATVTWL GQRQGPLREL ILEELLPLAR VGLEHQDVAG
DEIRHWLGLI RERVTSGRTG AAWQRAWWHR HGPNAPALVQ AMLRHQQTGE PVHRWAL
|
|---|
| |