| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0156 |
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| Symbol | |
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| ID | 4269287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 182160 |
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| End bp | 185027 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638124880 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_741001 |
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| Protein GI | 114319318 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC GCCCGCAACG CTCCCGTATC ACCCGTGCGC TCCGCCCCAT CAATCACGCC
GAGCGCATGC ATGGCGCCGG CTGGCGGCGG CGCCTGGGCG TCCTGGCCTT CTGTATCACC
CTCGGCGGCG GCCTCACTGC CTGCGACAAC ATGGGCGCCA GCACGGAGGA GGACTACCTG
GAACGGGCCC AGTCCCGGAT GGAGCAGGGG GACTATGCAG CTGCACGGGT CGAGTTTCGT
AATGCCCTGC AGTTGAACCC CCATGCGGCG GACACCCGGC GGGACCTGGG GCTCACCTAC
CTGGCGTTGG GGAATGTGGA CGAGGCCCGC CGGCAATTGC GCCGCGCCCT GGAGGAGGGG
GCCGACGAGG CGGAGATCGC CCTGCCGCTG GCAGAGGCGC TGTTCGAGCT GGACCGGCTG
GACGAGATCC GGGCCATGGG CGTGCCCCCG GGGCTGGACC GAGCATCCAA TGCCCGACTC
CACGCGCTGC GGGCGGTTGC CTTCGCCGCC ATCGGCCGGA CCGAGCCGGC ACAGTCAGAG
CTGACCGCCG TGGACGGGCA TGAATCGGCC GCCGCGCTGA GCGCGCTGGC CGAGGCCCAC
CTGGCACTGG CGGCCGGCGA CCATGAACAG GCCGAGCACT GGCTGGACCA GGCGCTGGAT
GCCGATCCGG AGCTGGGCCA GGCCTGGAGC CTGCTGGCCC GATACCACCG CATCATGGGC
GATAACGAGA GCGCCGAGGC GGCATACGGT CGGGCCATCG AACACCGGGC GGCCCCCGGC
CGCGATCACC TGCGGCGGGC CATGGTGCGC CTGGACCTGG GTGACCGCGA AGGCACCCGG
GCGGACATTG AGGGCCTCCG CCAGGGGGGC TCCGCGCACC CGGCCATCCC CTACCTGGAG
GGCATGCTGG CGCTCCAGAA CGAGAACTAC GGCGACGCCC GGCGCAGCTT CGAGGAAGCC
TTGGCCATGG ATCGCAGCTA CAGCGCGGCG CTGCTGGCCC TGGGCCAGAC CCTCCGCCGG
CTGGGCAGCG ACGAGCAGGC GGAGCACTTC CTCAACCGCC ATGTACAGGA GAGCCCGGGC
TCGCTTCAGG GGATTCGCAC CCTCATGGCG CTCTACGCCG AGCAGGAGCG CTTTGACGAC
GCCCTGCAGT TCCTGAACCG CGCCAGCCTG GACTATCCCG GTGATGCCGC CGACCTGCAC
GAGCTGCGGG GCCGCCTGAT GATGCTCTCC GGCGACCCGG AGCGCAGCGT GCAGGCCCTG
CGCAACGCCG TGGCCGCCCG CCCGGACGAG ACCGGGCTGC AGGAGCTGCT GGCCGTGGCC
CTGCTGCGCA GCGGCGAGAC CGAGGCCGGG CTCGACACCC TGCGCGCCGC GGGCACCCAG
GATGTGACCT CTCAGCAGCT TGACGCCACC ATGGTGCTCT TCCTGCTCCA GACCGGCCGG
TACGAGGAGG CCCTGGAGCG GGCCGAGCTG CTGCAGGCAC GGCAACCCGA CGCCGCGAGT
CCGCACAGCC TCGCCGGCGC GGCGCTGATG GGGCTGGGCC GGGTCGAGGA GGCGCGTGAG
GCCTTCAAGA AGGGCCTCGA GTTGGAGCCC GACAACCTCT CCGTGGCCAT GAACCTGGCG
AACCTGGAGT TGCAGACGGG CGACCGCGAG GCCGGCCGTC AGGTGCTCGA AGGTATTCAG
GAAGCACACC CGGGACACGC CCGCTCCGCC CAGCGCCTGG CCATGCTCAG CCTGCAGGAT
CAGGACACCC AGGGCGCCGC GAAGTGGCTG CAGCGGGCCA TCGATGCGCA GCCGGAGAGC
CTGCCCCCCC ACCTGATGCT GGCCCGCATC CAGGAGGACG AGGGCCGCCG GGAGGCGGCA
TTGCAGACCC TGCTGGGTGC CCGCGAACAC CACGGTGACA ACCCGGAGTT GCTTTACGCG
CTGGCCGATG TGCAGATGAG CCTGAATCAG ACCGACGAGG CCGTCGTGAG CCTCCAATCG
GCGGTCGAGC GCGCCCCCGA TAACACCGGC CTGCAGTTGG CCCTGGCGCG GGCGCAGGCC
CGGGCGGACG ACAACGAAGG GGCCGAGGCC ACCCTGGAGG CCCTGCTGGA ACAACAGCCC
AGCCACTACG AGGGGCGGAT GGCACTGACC CGGGGCCTGG TCAACCAGGG CCGGCTGGCC
GATGCCCGCC CCCACCTGGA TGAGCTGCAA GAGCGCTACG GCGACCGCCC GGAGGTTCAG
GCGTTGCTCG GCCAAGCGGC ACTGGCAGAC GACCGGCTGG AGCCGGCCAT TGAGCACTAC
CAGCAGGCAC TGGCCGACGC CGACCCGCAG CCACGCCCCT GGGTCCACGC CCTGGCGGAG
GCCCAGGTCG CCGCCGACCG CCCCGGGGAG GCCCTGGCCA CTCTGGGACG CTGGCTGGAG
GCCCACCCGG AGGACCGGGG CACCTGGCAC CTGTACGCCA GCCGTCAGCT CGCCTTGGGC
GACACGGCGG AGGCCTTGCA GGCCTATGAG CGCATCCTGG CGCAGGACAA TGACGACGCC
CTGGCCCTCA ACAACGCCGC CTGGCTCCTG CGCGACCGCG ACACCGAGCG CGCACTGGAC
TACGCCCGCC GGGCCGTGGA ACTGGTACCG GAATCGGCCC AGATCCATGA CACCCTCGGC
GTGGTGCTGA TCCACGCAGG CCAGCCCGCG GAGGCCCTGG AGACCCTGAC CCGGGCCGGC
GAACTGGCCC CCGAGTCGCC CACCATCCAG TACCACCTGG CCTGGGCCGA GCGCGAGGCC
GGCGATACCG AGGCGGCAAC CCGGCGCCTG AACCGGCTCC TTGAGGCCGA GCCCGATTTC
CCGGAACGGG ATGATGCGGA GCAACTGCTG GAGGACATCC GGCGCTGA
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| Protein sequence | MKKRPQRSRI TRALRPINHA ERMHGAGWRR RLGVLAFCIT LGGGLTACDN MGASTEEDYL
ERAQSRMEQG DYAAARVEFR NALQLNPHAA DTRRDLGLTY LALGNVDEAR RQLRRALEEG
ADEAEIALPL AEALFELDRL DEIRAMGVPP GLDRASNARL HALRAVAFAA IGRTEPAQSE
LTAVDGHESA AALSALAEAH LALAAGDHEQ AEHWLDQALD ADPELGQAWS LLARYHRIMG
DNESAEAAYG RAIEHRAAPG RDHLRRAMVR LDLGDREGTR ADIEGLRQGG SAHPAIPYLE
GMLALQNENY GDARRSFEEA LAMDRSYSAA LLALGQTLRR LGSDEQAEHF LNRHVQESPG
SLQGIRTLMA LYAEQERFDD ALQFLNRASL DYPGDAADLH ELRGRLMMLS GDPERSVQAL
RNAVAARPDE TGLQELLAVA LLRSGETEAG LDTLRAAGTQ DVTSQQLDAT MVLFLLQTGR
YEEALERAEL LQARQPDAAS PHSLAGAALM GLGRVEEARE AFKKGLELEP DNLSVAMNLA
NLELQTGDRE AGRQVLEGIQ EAHPGHARSA QRLAMLSLQD QDTQGAAKWL QRAIDAQPES
LPPHLMLARI QEDEGRREAA LQTLLGAREH HGDNPELLYA LADVQMSLNQ TDEAVVSLQS
AVERAPDNTG LQLALARAQA RADDNEGAEA TLEALLEQQP SHYEGRMALT RGLVNQGRLA
DARPHLDELQ ERYGDRPEVQ ALLGQAALAD DRLEPAIEHY QQALADADPQ PRPWVHALAE
AQVAADRPGE ALATLGRWLE AHPEDRGTWH LYASRQLALG DTAEALQAYE RILAQDNDDA
LALNNAAWLL RDRDTERALD YARRAVELVP ESAQIHDTLG VVLIHAGQPA EALETLTRAG
ELAPESPTIQ YHLAWAEREA GDTEAATRRL NRLLEAEPDF PERDDAEQLL EDIRR
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