Gene Mlg_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0126 
Symbol 
ID4269819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp142429 
End bp143664 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content67% 
IMG OID638124850 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_740971 
Protein GI114319288 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase
[TIGR03099] pyridoxal-dependent decarboxylase, exosortase system type 1 associated 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGGAC AACGCCCTTG CCATGCGCCC ATGGACCAGT TCGAGGTTGC CGACGGCATG 
CTGCAGGTGG GTGGCCGCCC GCTCTCCGAT CTGGTGCAGC AGGCCGGCGG TACGCCCTTC
TACGCCTACG ACCGTCGCCT GATGACCCGG CGTGTCGCGG CGTTGCGCCA GACCCTGCCA
GAGGGGATTG CGCTTCACTA CGCGATCAAG GCCAACCCCA TGCCTGCCGT GGTCCAGCAT
ATGGCCGGCC AGGTTGACGG TCTCGATGTG GCCTCGGCGG GGGAGTTGCG GGTGGCGTTG
GATGCCGGGG TGTCCGCGGC GGATATCAGC TTCGCCGGCC CCGGTAAGAC GGACGATGAA
CTGGCCGCGG CCGTAGCCGC GGGTATCACC ATCAACCTGG AGTCGGCCAC CGAGCTGGAG
CGGCTGGCCG CCATCGCGGA GAAGATCGGT CACCGACCCC ATGTGGCGGT GCGGGTGAAT
CCCGACTTCG AGCTCAAGAC CTCCGGGATG AAGATGAGCG GCGGGGCCAA GCCGTTCGGC
GTGGATGCGG AGGCGGTGCC GGCGTTGCTC AAACGCATTG CGGCGCTGGA TGTGCATTTT
CGCGGTTTTC ACATCTTTTC CGGGTCACAG AATCTGCGGG CCGAGGCCCT GGTGGAGGCC
CAGGGCCTGA CCCTGGACCT GGCGCTCCGG CTGGCGGACG ATGCGCCCGG CCCGGTGGAG
ATGCTGAATA TCGGCGGTGG CTTTGGCATC CCCTATTTCC CGGGCGACCG CCGGCTGGAT
CTGGCGCCGG TCAGTGAGCA GCTTGAAGCG CGGCTCCCGG CGGTGCGGGA GCGCCTCCCG
GGGGTGGAGA TCATCCTGGA GCTGGGGCGT TACCTGGTCG GCGAGGCCGG CATCTACGTG
GCGAAGGTAG TGGACCGCAA GGTCTCCCGC GGCCGCACAT TCCTGGTCAC CAACGGGGGG
TTGCATCACC ATCTGGCGGC ATCCGGCAAC TTCGGCCAGG TCATCCGCAA GAACTACCCG
GTCGCCGTCG GCAATCGCAT GGATGCCAGC GCCAGCGAGA CAGTGGATGT GGTGGGGCCG
TTGTGCACGC CGTTGGATAT CCTCGCCCAG CAGGTGGACC TGCCGCCGGC GCAGCCCGGT
GACTGGATCG TGGTGTACCA GTCCGGTGCC TACGGTTACA CCGCGAGCCC GACGCGGTTC
CTGGGGCATC CGGAACCGCT GGAGTTGCTC GTTTGA
 
Protein sequence
MNGQRPCHAP MDQFEVADGM LQVGGRPLSD LVQQAGGTPF YAYDRRLMTR RVAALRQTLP 
EGIALHYAIK ANPMPAVVQH MAGQVDGLDV ASAGELRVAL DAGVSAADIS FAGPGKTDDE
LAAAVAAGIT INLESATELE RLAAIAEKIG HRPHVAVRVN PDFELKTSGM KMSGGAKPFG
VDAEAVPALL KRIAALDVHF RGFHIFSGSQ NLRAEALVEA QGLTLDLALR LADDAPGPVE
MLNIGGGFGI PYFPGDRRLD LAPVSEQLEA RLPAVRERLP GVEIILELGR YLVGEAGIYV
AKVVDRKVSR GRTFLVTNGG LHHHLAASGN FGQVIRKNYP VAVGNRMDAS ASETVDVVGP
LCTPLDILAQ QVDLPPAQPG DWIVVYQSGA YGYTASPTRF LGHPEPLELL V