Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0078 |
Symbol | |
ID | 4269906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 84577 |
End bp | 87321 |
Gene Length | 2745 bp |
Protein Length | 914 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638124803 |
Product | transcriptional activator domain-containing protein |
Protein accession | YP_740925 |
Protein GI | 114319242 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.323405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG GAATCCACCT GCCGGCTTGG GGGAGCGTTG TGAGGCTGGA ACTGCGGACG CTGGGCAGGA CCGAGGCCCG GCTTGATGGC GAGGCATTGC CGGGGCTGTG CCATACCAAG ATCGGGCTGC TCCTGGTCTA TCTGGCCGTT GAGCGGCCGC GCCGCGTGCC CCGCCTGGAA CTGGCCGGGC GCTTCTGGCC GGACCAGGCG GCCGACGCCG GCCGGGCCAA CCTGCGCCAA GCGCTGTTCC AACTGCGCCG GCAACTGGGC GGGGCGGCGG CAGACCTGCT GCAGGCGGAC GCGCGCCAGG TGAGATTGCG GCCGGAGGCC GGGGTGTGGG TGGACGGTCT AAGGCTGGAG GCCTGCGTCC GGCCATCGGC GGCGCGGCAG CGACTCGACC CCGCGCAGTT GCTTACGGAG CTGAACGCCT ACCAGGGGCA CTTTCTGGTC GACCTCGGTG TGTCCCCGGA GGCCACCGGG CTGGAGGACT GGCTGACCCA AAACCGGCAG CGTTTCTGGC GTGCGGCGCT CACCCTCCTG GAGCAGTGCC TGGAGGAGCG GCCGAGCCCG GAGGACAACG AGCGGATCCT GCGGGAGCTG CAACGCTTTC TGGACCTGGA ACCCTTCGAT GAGGTATTGC ACCGGCTGAT GATGCGGGGG CTGGCCGCCG GCCGCCAGCC CACCCGCGCC CTCGACCATT TCCTGGCCTT CGAGGCATTG CTGCGGCGCG AGCTGGACAC CCGGCCCGGA CCGACCCTGC GCCGGCTCTA TAGCGAGCTG CGCGAGCGCC TGGCCCCCGC TGCCCAGGCC TCGGTGGAGG ACGTCCGTCT GCGCCCTGAG CGCCGGCGCG TGGCCTTGGT GGTCTGTGAC CTCCGCCCGC CCCCGCGCAC TGCCGGGCAG ACCGATGTGG AGACCCTGAC CGCTGCCGTG CAGCAGGGGG TCACCCGGGT GGAGAGCGCG TTGTTCGAGC ACCGGGGCCA CATCGTCCGC CTGCCCTGGG CCTGCCTGCT GGGCTATTTC GGTTATCCCA GCGGACGCGA GGAGGCCACC CTGGATGCCC TGCGCGCGGC CTGGGAGGCG TTGCAGAGCG GGCCCGCTGG GGTGCGCCCG CGGATCGCCG TGGACTCCGA CGTGATCATC ACCGGCAGTG AGCCGGAGGT GCCGGATCCG GCCGGTCTGC TCACCGCCCG CGCGCTGAGC CTGGCGGAGC GCACTGCCCC GGGCACGGTA GCGGTCTCGC CGGGGATTCG CGACCGTTTC CAGGGGCGCT TCCGTTTCGC CGGCGGTGGG ACGTCGGCAC CACGGCTGGT CAACAACCCC GGTCATGCCG ACCGGGTCGA GGCCCGGCTG GCGCGGGCAG CGGTCCCGCT GATCGGGCGG GCCGAGCCGC TGGCCCGGCT GCGCCGCGCC TGGCGTCAGG CCGCAGATGG CCGTTGCACC AGCCTGGTGA TCCGCAGTGA GGCCGGGCTG GGGAAAAGCC GCCTGGCCCG CGGCCTGGCG GAAGAGGTCC GGGAGGAGGC GGCGCTGGTG CTGATGCTGC CCTGCCGCCA GCGCCTCAAG CGACAGTTGC TGATGCCGCT GCGCCAGGCC CTGGCCGGCT GGATCGGTCC CCGGCCGGAC CAGCGCCGGG CCCGCGCCCG GCGGCGGCTA CTGCAGGCGC GGCTGCGCCC CCATTTGGAT CATGGCGCCG CCGCCCGCCG TCTGGCGGCC TGGCTGACCG ACACCGGCGA CCGCGGTCTG ATCCGCCAGG GCAGTGATCG CGACCGGGTG CTGGACAGCC TGGTCCAGGT ACTGGCCGGT GAGACCCGGC GCGGGCCGGT GCTTATCGTC TGTGATGACG CCCATTGGAT CGACTCCGGT ACCGCCGAAC TGTTTCGCCG CATTCAGCGC CGCCTGGCGC GGCACCCGGT GCTGCTGATC CTCACCGGCC GCATGAGCTT CCGCGCCGAG TGGCTACATA CCGCGCCTGG GGAGTTGCGC CTGAGCGGCC TCTCCGGGCC GGACAGCCAG CGGCTGATCC GCGCCCTGGA CGGCGATGGC GTGCTGCCGG AGGCCACCCG GCGCGCGATC AGCGCACGCG GCGAGGGTGT CCCGCTGTTC CTGGAGGAGC TGACCCTGCA CGCCCTGCAG CGGCACCGGG GCGGCGAGCC CGGGGCGGCC CTGCCGCCGG GGTTGTCCGA CCTGTTGGTC GCGCGGTTGG AGAGCCTGGG ACCCTGTCGC GAGCTGGCCC ACGCTGCTGC CGTCATCGGC CGGGAGTTCG ACAGCCGCCT GCTGGCCCGC CTCACCGGCA GCAACCTGGA CCAGGTGCAG ACCCAGGTGA AGCGGTTGAT GGCCCAGGGT TTCGTCGAGC GTGACGGCAG CCGCCTGCGG TTCCGGCACG CCCTGTTCCA TCAGGCCGCC TACGAGGCCC TGTTGGCCAC CGAGCGCCGG GCGCTGCACG GTCGCCTCGC GCAGTTGCTG GAGGAGGACG CCGCGCTCGG GCTGGACGCC CCGGACCACG AGGTACTGGC CGAGCACCTG CGTGAGGCGG GGCGTCCGGA GGAGGCGGTG GAGCACTGGC TGATGGCCGG GGAGCATGCC CTGGCTCTGG GCATGCTCCC CGAGGCGGAG CAGCATTGCG CCGATGCACT GGCATTACTG GGACGGCTCA CCGAGGCGGG GGGGCCGCCT GGGCGTCAGC GGAGCGATGG GCAGGCCCGA AAAAAAGGCG GGCCGGCTGA GCCGACCCGC CCAACACAAC GCTGA
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Protein sequence | MAGGIHLPAW GSVVRLELRT LGRTEARLDG EALPGLCHTK IGLLLVYLAV ERPRRVPRLE LAGRFWPDQA ADAGRANLRQ ALFQLRRQLG GAAADLLQAD ARQVRLRPEA GVWVDGLRLE ACVRPSAARQ RLDPAQLLTE LNAYQGHFLV DLGVSPEATG LEDWLTQNRQ RFWRAALTLL EQCLEERPSP EDNERILREL QRFLDLEPFD EVLHRLMMRG LAAGRQPTRA LDHFLAFEAL LRRELDTRPG PTLRRLYSEL RERLAPAAQA SVEDVRLRPE RRRVALVVCD LRPPPRTAGQ TDVETLTAAV QQGVTRVESA LFEHRGHIVR LPWACLLGYF GYPSGREEAT LDALRAAWEA LQSGPAGVRP RIAVDSDVII TGSEPEVPDP AGLLTARALS LAERTAPGTV AVSPGIRDRF QGRFRFAGGG TSAPRLVNNP GHADRVEARL ARAAVPLIGR AEPLARLRRA WRQAADGRCT SLVIRSEAGL GKSRLARGLA EEVREEAALV LMLPCRQRLK RQLLMPLRQA LAGWIGPRPD QRRARARRRL LQARLRPHLD HGAAARRLAA WLTDTGDRGL IRQGSDRDRV LDSLVQVLAG ETRRGPVLIV CDDAHWIDSG TAELFRRIQR RLARHPVLLI LTGRMSFRAE WLHTAPGELR LSGLSGPDSQ RLIRALDGDG VLPEATRRAI SARGEGVPLF LEELTLHALQ RHRGGEPGAA LPPGLSDLLV ARLESLGPCR ELAHAAAVIG REFDSRLLAR LTGSNLDQVQ TQVKRLMAQG FVERDGSRLR FRHALFHQAA YEALLATERR ALHGRLAQLL EEDAALGLDA PDHEVLAEHL REAGRPEEAV EHWLMAGEHA LALGMLPEAE QHCADALALL GRLTEAGGPP GRQRSDGQAR KKGGPAEPTR PTQR
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