| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0074 |
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| Symbol | |
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| ID | 4269902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 79807 |
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| End bp | 82380 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638124799 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_740921 |
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| Protein GI | 114319238 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.102755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGACCG GTCCGACCCG ATCCTCACCC GTGGACAGCC CCAATCCTGC ATTCGATGAT
CTGCACCGGG TCCTGGAGGC TAGCCCCGCC GTCACCTATG CCCTGACCCG TGACGGGCAG
TCGTTGCGGC CGGTTTACAT CAGCGCGCAC ATCGAGGAGT TGCTTGGCTA CCCGGTGGCG
GACTGGATGG CCGACCCGCA GTTTTGGCGG CAATGCCTGC ACCCGGACGA TCGTGAGCGG
GTGTTGGCCC AGTCGGCCCG CCACCTGCCC GAGGGGCTGG TGGACCACGA GTACCGGGTC
CGCCACCGCG ACGGCAGCTA TCGTTGGGTG CATGACCGCC TGCGGTTAAT GCCGGCGCGG
GACGGCCGGC CGGCGATGGC GGTGGGTGTC TGGCAGGACA TTACCCACCG GGCGCGGGCC
GATCGGCTGC TGCGCACGCT CTCCCACCTC ACCGCCCGGG TCACCGGCGA TGATTTCTTC
CGAACCCTGG TGCGGCACCT GGCCGAGGCT TTGGACATGC GTTACGTCCT GCTCGGCGAG
CTGCCCGGGC ACCCGCCCAC GCGGGTCCAT ACCCGGGCCC TGTACGCCGA CGGCGCGATC
CGGCCGAACG TGACCTACCC CCTGGCCGGA ACACCCTGTG CCCGGGTGCT GTCCGATGAG
CCCTGCCATT ACGCCAACGA TGTCTGCCGT GACTTCCCGG AGGACGAACT CCTCCGGGAG
ATGGCGGTGG AGAGCTATTT CGGCGTCCCC ATCCGGCGGG CCGACGGCAC CATCACCGGC
CTGTTGGCGC TGATGCACGA CCAGCCGCGC GAGATCTCGG CCACCGAGCG GGCGGTGATC
GCCCTCTTTG CCGCCCGTGC CGGTACCGAG CTGGCGCGCC ACCAGGCGGA GGAACAGCTC
CAGTTGATCG ACCAGGTCTT CGAGGGCAGT CGCGATGCCA TCATCATCAC CGACGCGCAG
ACGCGCATCC TGCAGGTGAA CCCGGCCTTC GAGGCCATCA GCGGCTACCG CGAGGAGGAA
TTGGTGGGCC GCACGCCCCG CCTACTTCAG TCGGGCCACC AGGGGCCGCG CTTCTACCGT
GAGATGTGGG AGGCGCTGAA GAGTCGGGGC CACTGGCAGG GGGAGCTGTG GAACCGGCGG
GCGGATGGCG AAACCTACCC CAGCCTGTTA TCGGTGAGCG CGGTGACCAA CGACAACGAC
GAGGTCACCC ACTATATCGG GATCGCCAGC GACATCACCT CACACAAGGC GGCCGAGCAG
CACATCGACT ACCTGGCCCA CTACGATACC CTTACCGGCC TGGGTAACCG GCGCCTGCTG
GAAGAGGAGC TGGAGCGCAT GCTGCGCAAT GCCCGCGGTG GCCGCCCCTT CGCCCTTTTT
TTCCTGGACC TGGACCGGTT CAAGAACATC AACGACACCC TGGGCCACGA GAGCGGCGAC
CGCCTGCTGG AGGAAGTGGC GGATCGGCTC CGCGACTTGG CCGGTCCGCA GGCGACCCTC
TGCCGCATCG GCGGTGATGA GTTCGCCATT CTGGCGCCCG GGCTGAGCCA CCGTCAGACG
GCCGGCATTG CCCGCCAGCT GGTGGAGGGG ATCTCCCGGC CCTATGAGAT CACCGAGCGC
CCGCTGGTGG TCACCTGCAG CGTCGGGGTG GCGGTTCACC CGCGCGACGG CACCCGCCGT
GAGGCCCTGA TCAGCGCCGC GGACACCGCC CTGCACTACG TCAAGGCCCA CGGCAGTAAC
CACTATCAGT TCCATGAGCC GGGCATGACT GCGGCCGCCG CTGAGCGCCT GCACCTGGAG
AACGACCTGC GTGAGGCGCT CCTGCGCGGG GAGTTCGAGC TCTACTACCA GCCGGTGCTC
GACACCGAGC GCCTCACGGT CTGCGGCGCC GAGGCCCTGC TGCGCTGGCA CCACCCGGAG
GCCGGTCTGA TCCCCCCCGA CCGCTTCATC CCGCTCGCCG AGGAGACCGG TCTGATCCGC
CCCATTGGGA CTTGGGTGCT GCGCGAGGCC TGTGCCCAGG CGGCGCGCTG GCGCCGGCTG
GGGCTGACCG GGATGACCGT CTCGGTGAAT GTCTCCGGCG AGCAGTTCTG GCGCGACGAG
CTGCCCCAGG CGGTGCGCCA GGCGTTGGAG GCGCAGGCCC TGGCGCCCGA CGCCCTGGTG
CTGGAGATCA CCGAGAGCGT GCTGATGCAC GGCAGCGCCA ACACCGAGAC CCGGCTGCGC
GAACTCAAGG CCATGGGGGT GGGGCTGTCG CTGGACGATT TCGGCACCGG CTACTCCAGC
CTCAGCTACC TGAAGCGCTT CCCCATCGAC ACGCTGAAGA TCGACAAGTC CTTTGTCCGT
GATATGGTCA GGGACGAGCA TGACCGTACC CTGGCGCAGA CGGTGATCGC CATGGGCCAC
GGTCTGGGCC TGCAGGTGGT TGCGGAGGGC GTGGAGAGTG CCGAACACCT CCCGCTGCTG
CGTCGTGCCC GCTGCGATCG CGTGCAGGGC TACCACTTCA GCCGGCCGCT ACCGGCCCGG
GCCTTGAGCC GGTGGATCCA GCAGCACCAG TGCAGCCGGT CACCGCAGGA CTGA
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| Protein sequence | MATGPTRSSP VDSPNPAFDD LHRVLEASPA VTYALTRDGQ SLRPVYISAH IEELLGYPVA
DWMADPQFWR QCLHPDDRER VLAQSARHLP EGLVDHEYRV RHRDGSYRWV HDRLRLMPAR
DGRPAMAVGV WQDITHRARA DRLLRTLSHL TARVTGDDFF RTLVRHLAEA LDMRYVLLGE
LPGHPPTRVH TRALYADGAI RPNVTYPLAG TPCARVLSDE PCHYANDVCR DFPEDELLRE
MAVESYFGVP IRRADGTITG LLALMHDQPR EISATERAVI ALFAARAGTE LARHQAEEQL
QLIDQVFEGS RDAIIITDAQ TRILQVNPAF EAISGYREEE LVGRTPRLLQ SGHQGPRFYR
EMWEALKSRG HWQGELWNRR ADGETYPSLL SVSAVTNDND EVTHYIGIAS DITSHKAAEQ
HIDYLAHYDT LTGLGNRRLL EEELERMLRN ARGGRPFALF FLDLDRFKNI NDTLGHESGD
RLLEEVADRL RDLAGPQATL CRIGGDEFAI LAPGLSHRQT AGIARQLVEG ISRPYEITER
PLVVTCSVGV AVHPRDGTRR EALISAADTA LHYVKAHGSN HYQFHEPGMT AAAAERLHLE
NDLREALLRG EFELYYQPVL DTERLTVCGA EALLRWHHPE AGLIPPDRFI PLAEETGLIR
PIGTWVLREA CAQAARWRRL GLTGMTVSVN VSGEQFWRDE LPQAVRQALE AQALAPDALV
LEITESVLMH GSANTETRLR ELKAMGVGLS LDDFGTGYSS LSYLKRFPID TLKIDKSFVR
DMVRDEHDRT LAQTVIAMGH GLGLQVVAEG VESAEHLPLL RRARCDRVQG YHFSRPLPAR
ALSRWIQQHQ CSRSPQD
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