| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0055 |
|---|
| Symbol | |
|---|
| ID | 4270924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 59312 |
|---|
| End bp | 59959 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638124780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_740902 |
|---|
| Protein GI | 114319219 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03360] type VI secretion-associated protein, VC_A0118 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC CCCGTCTCCT GCCCCTGCTT GTGCTCCTGC CGTTGCTGGC GATGCCTGCG
GCCCAGGGCG CCGATGGGGA AAGCGGCCCC CCGGCCCACC GCTGCGCCGC CATCGAGAGC
CGGGCCGAGC GACTGGCCTG CTACGACGCC CTCTTCCCCC CTGACGCCGT AGCGGCCGGG
GCGAAGGCCT TGGCCGCGCC CCCGCTGTGG CAGGCCGCGG CACGCCAGGA GCGACGCCGG
GCGGCGGACG ACCGGGGGCT GGCGGTCGAT ACGACGGAGG GTGAGGGTGT ATTGCTCACG
GCCCCGGCCC TGGGCACCGC CCCGCCACGG CCCACGCTGG TCCTTGCCTG CCACAACGCC
ATCACCCACT TCGAGCTCCA CCTGCCCGAG GCCGGTGGCC GGGGGCGGGT GGAACTCACC
CTGGCCCGGG GTGAGACCCG GCTGCGGCAG ACCTGGCAGA TGCGGGCAGA CGGGCATGTG
CTCAGCGGCG GGCGTGGCCT GCCGGCCATA GCGACCCTGC GTCAGCTGCT GCCCGGCGGC
ACCCTGACCC TCCGCAGCGA CGATGCGCCC GCGCTGGACG GACTGCGTTT CCAGCTGGGT
GACCTTCGGG AAGCCCTGAA ACCGCTGAGG AACCAATGCC AATGGTAG
|
|---|
| Protein sequence | MSRPRLLPLL VLLPLLAMPA AQGADGESGP PAHRCAAIES RAERLACYDA LFPPDAVAAG
AKALAAPPLW QAAARQERRR AADDRGLAVD TTEGEGVLLT APALGTAPPR PTLVLACHNA
ITHFELHLPE AGGRGRVELT LARGETRLRQ TWQMRADGHV LSGGRGLPAI ATLRQLLPGG
TLTLRSDDAP ALDGLRFQLG DLREALKPLR NQCQW
|
|---|
| |