| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0002 |
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| Symbol | |
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| ID | 4269606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1651 |
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| End bp | 2751 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638124729 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_740851 |
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| Protein GI | 114319168 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000466477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.315264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG ATATCCAACG CGAAGACCTG CTCAAGCCTC TACAAGCCAT CATCGGCGTC
GTGGAACGAC GGCAGACCCT GCCGGTGCTG GCCAACGTCC GCCTGGAGTT GGGCGACGGC
CTGGCCCGGC TGACCGCTAC CGATCTGGAA GTGGAACTGG TCGCCAGTCT GCCCTGCCAA
GTCACGGAAG GCGGGGACAT CACACTGCCG GCGAGGAAGC TGCTGGATAT TTGTCGCAAC
CTGCCGGATC AGAGTCAGAT CCAGCTTCAG GTCGACGGCG AACGGGCGAG TCTGCGGGCC
GGGCGGAGTC GGTTCACCCT CGCCACACTG TCGGCGGACG ATTACCCGAG CATCGAAGAC
ATTGGCGCCC GGGAGACCGT GCGGCTGCCC CAGGGGCAAC TGAGGAAGCT GATTGAGCGC
ACACACTTTT CCATGGCCGT GCAGGATGTC CGGTACTATC TGAACGGGCT GATGGTGGAG
CTGGAACCGG CGATGGCGCG CATGGTGGCC ACCGACGGCC ACCGCCTGGC ACTGGCCGAG
CAAGCCATCG ACACCGGGGT CGAGGCACCG CGTCAGGTGA TTGTCCCGCG CAAGGGGGTT
CAGGAACTGT TACGGTTGTT GGATCACAGC GATGAGGGGG CCGACCTGGA GTTGGGCGAC
AACCATATCC GGGTCAAGCT CGGGGACGTC CGGTTCACCT CCAAATTGAT CGATGGCCGC
TTCCCGGACT ACCGTCGGGT GGTGCCGGAG GCCACCGAGA CCCCCGCGAC AGTGAATCGG
GAGGACCTTC GCCACGCCCT CCTCCGGGTC TCGATCCTAT CCAACGAAAA GTACCGCGGT
GTCCGGTTCC TGCTCGACGG TGGTACGCTC AAGGTCGCAT CGCACAACCC CGAGCAGGAG
GAGGCCGAAG AGGAGGTCTC GGTCGACTAC GGCGGGGCCC CGCTGGAGGT CGGCTTCAAT
GCCGGGTATG TGCTCGATGC GCTGGGGGCG TTGGACGATG AGGATGTTCG CCTGACACTC
CGGGACAGCG CGAGCAGTGG GCTGATCCAA GGGGTAGACG ACCAGACCTC AAGGTACGTC
GTCATGCCCA TGCGCCTGTG A
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| Protein sequence | MRIDIQREDL LKPLQAIIGV VERRQTLPVL ANVRLELGDG LARLTATDLE VELVASLPCQ
VTEGGDITLP ARKLLDICRN LPDQSQIQLQ VDGERASLRA GRSRFTLATL SADDYPSIED
IGARETVRLP QGQLRKLIER THFSMAVQDV RYYLNGLMVE LEPAMARMVA TDGHRLALAE
QAIDTGVEAP RQVIVPRKGV QELLRLLDHS DEGADLELGD NHIRVKLGDV RFTSKLIDGR
FPDYRRVVPE ATETPATVNR EDLRHALLRV SILSNEKYRG VRFLLDGGTL KVASHNPEQE
EAEEEVSVDY GGAPLEVGFN AGYVLDALGA LDDEDVRLTL RDSASSGLIQ GVDDQTSRYV
VMPMRL
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