Gene Shewmr7_R0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_R0001 
Symbol 
ID4255050 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp41406 
End bp42940 
Gene Length1535 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID640717343 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00134291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00347665 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
AGAGTTTGAT CATGGCTCAG ATTGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC 
GGCAGCACAA GGGAGTTTAC TCCTGAGGTG GCGAGCGGCG GACGGGTGAG TAATGCCTAG
GGATCTGCCC AGTCGAGGGG GATAACAGTT GGAAACGACT GCTAATACCG CATACGCCCT
ACGGGGGAAA GAGGGGGACT TTCGGGCCTC TCGCGATTGG ATGAACCTAG GTGGGATTAG
CTAGTTGGTG AGGTAATGGC TCACCAAGGC GACGATCCCT AGCTGTTCTG AGAGGATGAT
CAGCCACACT GGGACTGAGA CACGGCCCAG ACTCCTACGG GAGGCAGCAG TGGGGAATAT
TGCACAATGG GGGAAACCCT GATGCAGCCA TGCCGCGTGT GTGAAGAAGG CCTTCGGGTT
GTAAAGCACT TTCAGTAGGG AGGAAAGGGT GAGTCTTAAT ACGGCTCATC TGTGACGTTA
CCTACAGAAG AAGGACCGGC TAACTCCGTG CCAGCAGCCG CGGTAATACG GAGGGTCCAA
GCGTTAATCG GAATTACTGG GCGTAAAGCG TGCGCAGGCG GTTTGTTAAG CGAGATGTGA
AAGCCCCGGG CTCAACCTGG GAATTGCATT TCGAACTGGC AAACTAGAGT CTTGTAGAGG
GGGGTAGAAT TCCAGGTGTA GCGGTGAAAT GCGTAGAGAT CTGGAGGAAT ACCGGTGGCG
AAGGCGGCCC CCTGGACAAA GACTGACGCT CAGGCACGAA AGCGTGGGGA GCAAACAGGA
TTAGATACCC TGGTAGTCCA CGCCGTAAAC GATGTCTACT CGGAGTTTGG TGTCTTGAAC
ACTGGGCTCT CAAGCTAACG CATTAAGTAG ACCGCCTGGG GAGTACGGCC GCAAGGTTAA
AACTCAAATG AATTGACGGG GGCCCGCACA AGCGGTGGAG CATGTGGTTT AATTCGATGC
AACGCGAAGA ACCTTACCTA CTCTTGACAT CCAGAGAATT CGCTAGAGAT AGCTTAGTGC
CTTCGGGAAC TCTGAGACAG GTGCTGCATG GCTGTCGTCA GCTCGTGTTG TGAAATGTTG
GGTTAAGTCC CGCAACGAGC GCAACCCCTA TCCTTATTTG CCAGCGCGTA ATGGCGGGAA
CTCTAGGGAG ACTGCCGGTG ATAAACCGGA GGAAGGTGGG GACGACGTCA AGTCATCATG
GCCCTTACGA GTAGGGCTAC ACACGTGCTA CAATGGCGAG TACAGAGGGT TGCAAAGCCG
CGAGGTGGAG CTAATCTCAC AAAGCTCGTC GTAGTCCGGA TTGGAGTCTG CAACTCGACT
CCATGAAGTC GGAATCGCTA GTAATCGTGG ATCAGAATGC CACGGTGAAT ACGTTCCCGG
GCCTTGTACA CACCGCCCGT CACACCATGG GAGTGGGCTG CAAAAGAAGT GGGTAGCTTA
ACCTTCGGGA GGGCGCTCAC CACTTTGTGG TTCATGACTG GGGTGAAGTC GTAACAAGGT
AGCCCTAGGG GAACCTGGGG CTGGATCACC TCCTT
 
Protein sequence