Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_4019 |
Symbol | |
ID | 4257877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4776970 |
End bp | 4778511 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638124711 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_740053 |
Protein GI | 114049503 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.178893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCGA GCAGTTCGAA GTCGTTAGCG AATCTCGTAA CGAAGGTACT ATCGTTGCGG TTAGTGACGG CATTATCCGC ATCCACGGCC TAGCCGATGT GATGCAAGGT GAAATGATCG AACTGCCTGG TAGCCGTTTT GCAATCGCGT TGAACCTTGA ACGTGATTCT GTCGGTGCCG TAGTAATGGG TCCTTATGCT GATTTAGCAG AGGGCGTAAA AGTTAAAACT ACTGGCCGTA TTCTGGAAGT TCCAGTCGGT CGCGGCCTAT TAGGCCGTGT AGTTAACACT CTGGGTGAGC CAATTGACGG AAAAGGCGCT ATCGACAACG ATGGTTTCTC TCCTGTTGAA GTGATCGCAC CAGGTGTTAT CGAGCGTAAG TCAGTAGATC AACCAGTTCA AACTGGTTAT AAAGCCGTTG ACGCTATGAT CCCAATCGGT CGTGGCCAAC GTGAATTGAT CATTGGCGAC CGTCAAACTG GTAAAACAGC TATGGCGATC GACGCAATCA TCAACCAGCG CGATTCTGGC ATCAAATGTG TGTACGTAGC TGTAGGCCAA AAGGCTTCTA CTATTGCTAA CGTAGTACGC AAGCTAGAAG AGCACGGTGC ATTAGCTAAC ACTATCGTTG TAGTAGCAAC AGCTTCTGAA GCTGCGGCAC TGCAATACTT AGCACCATAC TCTGGTTGTG CTATGGGTGA ATACTTCCGC GACCGCGGTG AAGATGCTCT GATCGTATAC GATGACCTGT CTAAGCAAGC AGTTGCTTAC CGTCAGATCT CGTTACTGCT GAAGCGTCCA CCAGGCCGTG AAGCTTATCC TGGTGACGTA TTCTATCTAC ACTCTCGTTT ATTAGAGCGT GCTTCACGCG TAAACGAAGA ATATGTAGAA AAGTTCACTA AGGGTGCTGT AACAGGTCAA ACCGGTTCTT TAACCGCGCT GCCTATTATT GAAACTCAGG CGGGTGACGT ATCTGCATTC GTACCGACCA ACGTAATTTC TATTACTGAC GGTCAGATCT TCCTTGAGAC CGATCTGTTT AACTCTGGCT TACGTCCAGC GGTTAACCCA GGTATTTCTG TTTCTCGTGT TGGTGGTGCG GCTCAGACTA AGATCATCAA GAAACTGTCT GGTGGTATCC GTACCGCTCT AGCACAGTAT CGTGAACTTG CTGCGTTCTC ACAGTTTGCA TCTGACTTAG ACGATGCAAC TCGTGCTCAA CTTGAGCATG GTGTGCGTGT TACCGAACTG ATGAAGCAAA AACAATATGC TCCTATGAGC GTAGCCGCTC AAGCTGTGTC TATTTTCGCA GCTGAAAAAG GTTACCTGAA GGGCGTTGAG CTGAACAAAG TTGGTGATTT CGAAGCCGCT CTGCTCTCGT ACATGAACAG CGAGCATGCT GCTTTAATCA AGCTTATCAA CGAGACTGGC GATTATAACG CCGATATCGA AGCTGAATTA AAAGCTGGCC TCGACAAGTT CGTAGCAACC CAAACCTGGT AA
|
Protein sequence | MQLNSTEISD LIKQRIEQFE VVSESRNEGT IVAVSDGIIR IHGLADVMQG EMIELPGSRF AIALNLERDS VGAVVMGPYA DLAEGVKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGA IDNDGFSPVE VIAPGVIERK SVDQPVQTGY KAVDAMIPIG RGQRELIIGD RQTGKTAMAI DAIINQRDSG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY SGCAMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER ASRVNEEYVE KFTKGAVTGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ LEHGVRVTEL MKQKQYAPMS VAAQAVSIFA AEKGYLKGVE LNKVGDFEAA LLSYMNSEHA ALIKLINETG DYNADIEAEL KAGLDKFVAT QTW
|
| |