| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_4007 |
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| Symbol | |
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| ID | 4257865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4755739 |
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| End bp | 4758189 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638124696 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_740041 |
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| Protein GI | 114049491 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGCA AACTCTCGCT CGCCGTATTG ATACCTGCAT GTATGCTGGC ACTGTATTTA
GTGTTAGTGA CGGCTGAGTA TTTTTATGAG AGTGAGTTGG TGCGAAATGA ATTAGCTGAC
CGCCAAGTCA GCCAGATCAA GCAGCAGTTA TTACGTATGC AAGCCGTGGT GCAATCGGCG
CAAGCATTAC AAGACATAGA ACGGATCGAG CAGGAAGTCT CTCTGGCGAC CTTGGATATG
AACGTCATGG TTTATATCTT ACTGGACGCC AATAGCCTGA TCCGCTTTGC AAATCATACA
GTTTGGCGTG ATAGCAATGC CATTGAAGTC ATCGATGGAT ATGATGTGGT TCAGCATCAT
GCGGTGGTGC AATCCGGTCA AGCAAGTATT TTTGTTAATC CTAAAAGGTT GTCTATTCAA
GCTTATTATC CTGTGGAAGC TCAATATCCC GGCGCCACAG AGCTGGTCTA TCTCGAGTCA
GATTTAGCCC CTCTGGTTGC GCGAGCTTCT ACCGAGTTAC AGCAAAGATT TATGCGTGTC
TGGGGGCTTG GGGCGCTGCT GCTAATCGGT TTTACCTTTG TTTTATATTA TCTGCTGATC
CGCCCATTTA AGATGTTGAG TCAATCAGCC AAACACGTTG GAACTCCCGA GTTTTCAACT
CAAGTGCCTT GGAGCGCGTC CGAGGTTTTA TCCCTACAGA CGAGTCTGCA GCAGGTTCAT
GAGCGCTTAG CGCGAGCCGT CAAGCAGCTA AATGACAGTG AGCAACGTTG GTTGTTTGCG
GTCGAAGGCT CGCGTAACGG TATTTGGGAT TGGGATATTC GGACTGGTGA GGTGTTTTTG
TCTGATCGCT GGAAGGAAAT GATCGGCTAT CAGCCCGACG AACTCGAAGG TGCATTCCAG
ACTTGGGAGA GCCGTTTGCA TCCCGATGAT AGACAAACCG TGTTGGACTG TCTGCAGGAA
TACGTCAGCG GCAAGACAAA AGAATTTGAG AGTGTGCATC GTTTACTGCA TCGCGATGGC
CATAATGTCT GGGTATTCGA CCGTGGCATG TTGGTTGATT GGGATCATCT CGGTCGCCCC
ACTCGCATGA TTGGTATTCA TGTGGATGTG TCTGAGAGTG AGCGAAACCA TGCCGCGATC
GCCGAGTTGG TTAAGCAATC TGAGACAGGC CATAGGATGC TCCCCGAAGC CTTTATGCTG
CAGTTGTCCC AATATATTAG CCAGCGAAGC AGCACTGGTC ACTGGGACGC CTTGTTATTA
CTTAACGTTG AAACTCATGG TGTTAGTAAT ACGCTAACCT CCCATGAGCT TGAACGATTA
TTATCGCAAC TGAGTGCGAG GCTCTCGAGT TATTTTGCTG AAAATATTGT GGTATCCCAT
ATAGAGCTTG ATCAGTTTGC AATTTTGATC AAAGAGTTGG CGGCTGACGC TAAGATGGCT
GGTCGGCGCG CATTGGCACT CGCGACTGAG TTAAGGCATA TAGCATCGCG TCCATTTCAT
CATGCTGACC AGTGTGTCAA CTTCAGCACC AATATTGGTA TTTGCTTATT GGATTCGATT
GAAACGATCG CGCCTGAGAT TGCACTGCGC CGCGCCGAAT TAGCGATGCA ACATGCTCAC
TCGCTCGAGG AGGCCGGCTG TGCCTTCTAT CATCCTGATT TAGAACATAT TCAAGATCCT
GAATTGTCGT TATGCCAGCA ACTAAAGCGT GCTATTACAG ACAATCAGTT GTCATTGATG
TTCCAGCCCG TTGTGGATAT GCAAGGAAAG ATAGTCGCTG CCGAAGTCTT ATCCCGTTGG
CATTTAGCCA ACGGTGATAT TATCCCCGTC GCTAAGTTTA TTGGCCTCGC CGAGCGCCAT
GGTCTGATTG CATCACTCGA TTTAAATGTG GCTACGCGCG TTTGCCAGTT GATTAAACAA
TTTAAACAGC AGGGCATTAG CCTGCCACGT TTAACTTTGA ATATCAGTAC CTTCTCTTTC
TGCCAAGCTG ATTTCGTCGA GCAATTAGTT GCGTTAACCC GTCGCTACGA GCTGGATGAC
AATCAGCTGG GTATTGAGTT AACCGAGAGT GCATTACTAA CATCAGCCTC CTTTATTCAG
CCGAGGATCA GTCTGCTCGC GGAAGCTGGA GTTGCGATAA CATTAGATAA CTTTGGTGCG
GGACAGGGCG CCTTGAGTTG CTTGCGTCAC TATCCCTTGA ATGAGGTGAA GCTCGATTTA
CATTGTGCCG CTAACTTAAC GACTGATACG AGCTGGAGCC AAGCGCTGAT TCAGTCGGTA
CAAGCCTTTA ACTTGTTTAT TGTGGCCAAA GGCGTCGAAT CACCGCAGCA ACAGCAACTC
TTTAGCCGCT TAGGTTGTAC CCATTTCCAA GGCTACAATA TTGCGCGTGC CTTAAGTGTT
AATGACTTTA AACAGCTTGT TTGTCCACGT CCCTTGTTGC GTAGCGTTTA A
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| Protein sequence | MLRKLSLAVL IPACMLALYL VLVTAEYFYE SELVRNELAD RQVSQIKQQL LRMQAVVQSA
QALQDIERIE QEVSLATLDM NVMVYILLDA NSLIRFANHT VWRDSNAIEV IDGYDVVQHH
AVVQSGQASI FVNPKRLSIQ AYYPVEAQYP GATELVYLES DLAPLVARAS TELQQRFMRV
WGLGALLLIG FTFVLYYLLI RPFKMLSQSA KHVGTPEFST QVPWSASEVL SLQTSLQQVH
ERLARAVKQL NDSEQRWLFA VEGSRNGIWD WDIRTGEVFL SDRWKEMIGY QPDELEGAFQ
TWESRLHPDD RQTVLDCLQE YVSGKTKEFE SVHRLLHRDG HNVWVFDRGM LVDWDHLGRP
TRMIGIHVDV SESERNHAAI AELVKQSETG HRMLPEAFML QLSQYISQRS STGHWDALLL
LNVETHGVSN TLTSHELERL LSQLSARLSS YFAENIVVSH IELDQFAILI KELAADAKMA
GRRALALATE LRHIASRPFH HADQCVNFST NIGICLLDSI ETIAPEIALR RAELAMQHAH
SLEEAGCAFY HPDLEHIQDP ELSLCQQLKR AITDNQLSLM FQPVVDMQGK IVAAEVLSRW
HLANGDIIPV AKFIGLAERH GLIASLDLNV ATRVCQLIKQ FKQQGISLPR LTLNISTFSF
CQADFVEQLV ALTRRYELDD NQLGIELTES ALLTSASFIQ PRISLLAEAG VAITLDNFGA
GQGALSCLRH YPLNEVKLDL HCAANLTTDT SWSQALIQSV QAFNLFIVAK GVESPQQQQL
FSRLGCTHFQ GYNIARALSV NDFKQLVCPR PLLRSV
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