Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_4006 |
Symbol | |
ID | 4257864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4754769 |
End bp | 4755782 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124695 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_740040 |
Protein GI | 114049490 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CGCCCCTAAA CTTTCCAAGG GAAGAGTTTT CCAAGGTAGC TTTTTCAACG GAACACAATT TAAATACTTC TGAACAGCAA GCCTTCTGGC AAACCGTTGT CCAAGACACA CTCAAAACGT CCGATGGATT AACCTTGGCC TACATGATGG TCAAGCATCC CAAGGCCCAT GCCAGCATAG TCATCAGTAG TGGCCGGGTT GAGTCCTACT TAAAGTATCA AGAACTCGTT TTTGATTTGT ACCAGCAAGG CTATTCGGTA TTTGCTATCG ATCACCGCGG CCAGGGATTA TCGAGCCGCA TGACGGCCAC CCCCCATCAA GGCCACGTGC GACGATTCAA CGACTATATC GACGACTTTG CCCTGTTTAT GCAAACCGTT GTACTCAAAC ATGCCACTTC GCCACTGTTC TTGCTCGGGC ATTCTATGGG CGGCGCTATC GGCACCTTGT ATCTCAAACA ACATCCCGAT GTGTTTACGG CGGCAGCATT CTCCGCCCCC ATGTACGGCA TTAAGTTACC TATGCCCAAA GGGTTTGTCC GTTGGCTTGC GAGTAAGCTC GATGCCAGTC TCAACGGTGG AGAGCCTAAC TATGTCCTCA GCGGGCAAAA CTATAAGGCA GCTCCCTTTA AGGGCAATGA TCTCACCCAT TGCCAGAGTC GTTATCAAGC CTACCGAGAG TTGTACGATG CGGCGCCAAA GCTGCAATTA GGCTCACCCA CTAACCGCTG GTTGACTGAA TCCTTAGATG CGGCCGATGC CTGTGTCTTG GCCACAGCAC ATATCCGTAC GCCTATTCTG ATCCTGCAAG CCAGTGAGGA TAAGATCGTC GACAATGCTG CACAAAATCT GGCGGTAAGC TCAAATTGCC AATTAAAGGT GATTGCAGGG GCTGCCCATG AGATTTTTAT GGAGAAAGAT AGCTACCGTA ATCAAGCGCT TAATTACGCG CTCGACTTTT TTAAACGCTA CGCAACAAGG GACGTGGACA AACAAGCTGT TTAA
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Protein sequence | MSQTPLNFPR EEFSKVAFST EHNLNTSEQQ AFWQTVVQDT LKTSDGLTLA YMMVKHPKAH ASIVISSGRV ESYLKYQELV FDLYQQGYSV FAIDHRGQGL SSRMTATPHQ GHVRRFNDYI DDFALFMQTV VLKHATSPLF LLGHSMGGAI GTLYLKQHPD VFTAAAFSAP MYGIKLPMPK GFVRWLASKL DASLNGGEPN YVLSGQNYKA APFKGNDLTH CQSRYQAYRE LYDAAPKLQL GSPTNRWLTE SLDAADACVL ATAHIRTPIL ILQASEDKIV DNAAQNLAVS SNCQLKVIAG AAHEIFMEKD SYRNQALNYA LDFFKRYATR DVDKQAV
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