Gene Shewmr7_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_4004 
Symbol 
ID4257862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4751654 
End bp4752649 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content49% 
IMG OID638124693 
Productadenosine deaminase 
Protein accessionYP_740038 
Protein GI114049488 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.443462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATA CATCCATTCC ATTGGTGGAT TTGCATCGTC ACTTAGATGG TAACGTGCGA 
GTGAACACCA TTTGGGAACT CGGACACCAA CACGGCATTG CTTTACCTGC CGATTCTTTA
GAGACTCTTG CGCCATTTGT ACAAATTCAG GGGAAAGAAA CCAGCTTAGT TGCCTTCTTG
AAGAAGCTTG ACTGGATGGT GGCAGTTCTC GCTGATTTAG ATGCGGTAAA ACGTGTCGCC
TATGAAAACG TGGCTGATGC GGCGTTATCA GGCCTTGATT ATGCGGAGCT GCGTTTTAGC
CCATATTACA TGGCGATGAA CCATAAACTA CCGATTGAAG GTGTGGTTGA AGCGGTTATC
GATGGGGTGA AAGCGGGCCT GAAAGATTAC CAAGTTAAAA TCAATCTTAT CGGGATTATG
TCGCGCTCAT TCGGCCAAGC TGCTTGTGCT CAGGAGCTTG AAGGCCTGCT CGCCCATAAA
CAACATTTAG TCGCGATGGA TTTAGCCGGC GATGAGCTGG GTTTCCCTGG CGAATTGTTT
AACGAACACT TTAAACGAGT GCGAGACGCG GGCTTAGCCA TTACCGCCCA TGCGGGGGAA
GCGGCCGGTT CACAAAGTAT GTGGCAAGCG ATTCAGGAGC TGGGCGCGAC ACGTATCGGC
CATGGTGTGA ATGCGATACA CGATCCTAAG CTGATGGATT ATCTCGCTAA ACACCGTATT
GGGATCGAAT CTTGCCCAAC CAGCAACCTG CACACGTCGA CCGTGTCTTC CTATGCAGAA
CATCCCTTCA GAACCTTTAT GGATGCGGGT GTGTTGATAA GCCTTAACAC CGATGATCCG
GGTGTGAGTG CGATTGATAT CAAGCATGAG TATCGCATAG CTAAGTCTGA ACTAGGACTA
AGCTATGCTG AACTGGCTCA GGTGCAACGC AACGGGGTGG AAATGGCGTT TTTATCCGAG
AGTGAGCGCA AGGCGCTGTA TGCGGCTAAA GCTTAA
 
Protein sequence
MINTSIPLVD LHRHLDGNVR VNTIWELGHQ HGIALPADSL ETLAPFVQIQ GKETSLVAFL 
KKLDWMVAVL ADLDAVKRVA YENVADAALS GLDYAELRFS PYYMAMNHKL PIEGVVEAVI
DGVKAGLKDY QVKINLIGIM SRSFGQAACA QELEGLLAHK QHLVAMDLAG DELGFPGELF
NEHFKRVRDA GLAITAHAGE AAGSQSMWQA IQELGATRIG HGVNAIHDPK LMDYLAKHRI
GIESCPTSNL HTSTVSSYAE HPFRTFMDAG VLISLNTDDP GVSAIDIKHE YRIAKSELGL
SYAELAQVQR NGVEMAFLSE SERKALYAAK A