| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_4003 |
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| Symbol | |
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| ID | 4257861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4750243 |
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| End bp | 4751583 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124692 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_740037 |
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| Protein GI | 114049487 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.258904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA AATATAACTA CAGCGGTCCC CGTTACACTT CTTACCCAAC GGCGCTGGAG
TTCGATGATT CATTCACTGA ACAAAACCTG TTAACGGCGA TTGAAAACAG TAAGAGTGAC
AAACTGTCGC TGTATATTCA CATCCCCTTC TGCGCCAAAC TTTGCTACTA CTGTGGCTGT
AATAAAGTTA TCACTCGCCA CGCCCACAAG GCCGATCAAT ATATCGAGTA TTTGAGCCAC
GAAATTATTA AGCGCGCTCC GCTGTTTAAG CACTACACAG TCACCCAAAT GCACTGGGGC
GGCGGCACAC CAACCTTCTT AAATCCTGAG CAAATTCTGA AGTTAACCGA CTTAATCAAG
GCTAACTTTA ACTTTGCCGC TGAAGGTGAG TTCTCTATCG AAGTTGACCC GCGTGAGATT
GAGCTTTCAA TGCTCGATAC CTTAAAAGAA GCGGGCTTTA ACCGCATTTC TATCGGGGTG
CAAGACTTCA ATAAAGAAGT ACAAGTCGCG GTTAACCGTG AGCAGGACGA GCAATTTATT
TTCGATTTAA TGGCCAAAGC CAAGGCCATG GGATTTGTCT CAACCAATAT CGACTTAATT
TACGGTCTGC CACATCAGAC ACCAGAAACA TTCGCCGCCA CTATGCAGCG CGTGTTAGAC
CTGTCGCCCG ATCGTCTATC TGTGTTCAAC TATGCCCACT TACCCGCGCG TTTTGCCGCG
CAGCGTAAGA TTAAAGATGA ACATTTACCA TCGCCAAAAC AAAAACTCGA GATGTTGCAT
CAAACAATCG AGACTTTAAC TGGCGCAGGT TATCAGTACA TCGGCATGGA TCACTTCGCT
AAGCCTGACG ATGAGCTGGC TAAGTTACAA CGCGAAGGCA AACTGCACCG CAACTTCCAG
GGTTATACCA CCCAAGAAGA ATGCGACCTG CTTGGTCTTG GCGTGTCTTC TATCAGCCAA
ATCGGCGATT GTTATGCGCA AAACCAGAAG GACATTCGTC CTTACTACGA AGCCATCGAC
AAAGACGGAC ATGCATTGTG GAAAGGTTGT AGCCTGAACC GTGACGACGA AATTCGCCGT
GTCGTGATCA AACAACTGAT CTGCCACTTC GATTTAGATA TGGCAAAAAT GGATGACAAA
CTGGGTATTA AGTTTGAGGA ATACTTCGCC GAAGACTTAA AACTGCTGCA AACCTTTATC
GACGATAAGT TAGTCGACGT CACCGACAGA AAGATCACCA TCAGCCCCAC TGGCCGTCTG
TTGATCCGCA ATATCTGTAT GTGCTTCGAC CTTTACTACC GTCAAAAAGC GCGTCAACAA
CAGTTCTCCC GAGTGATCTA A
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| Protein sequence | MIEKYNYSGP RYTSYPTALE FDDSFTEQNL LTAIENSKSD KLSLYIHIPF CAKLCYYCGC
NKVITRHAHK ADQYIEYLSH EIIKRAPLFK HYTVTQMHWG GGTPTFLNPE QILKLTDLIK
ANFNFAAEGE FSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQVA VNREQDEQFI
FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAATMQRVLD LSPDRLSVFN YAHLPARFAA
QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGKLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KDGHALWKGC SLNRDDEIRR
VVIKQLICHF DLDMAKMDDK LGIKFEEYFA EDLKLLQTFI DDKLVDVTDR KITISPTGRL
LIRNICMCFD LYYRQKARQQ QFSRVI
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