Gene Shewmr7_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3999 
Symbol 
ID4257857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand+ 
Start bp4746689 
End bp4747312 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID638124688 
Productcytochrome c, class I 
Protein accessionYP_740033 
Protein GI114049483 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.898029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.022349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TAGCTCTTGC GCTGTCTGTT GTAGTTGCCG CCATATCTTC ACCTGCGATT 
GCTGAAGGTA ATGCTGAAGC GGGAAAAACT AAAGTTATCG TTTGTTCTGC CTGTCACGGC 
ATGGACGGTA ACAGTATGAT CGATATGTAC CCTAAGCTTG CGGGCCAACA CGCCACATAC 
CTCCAAAAGC AACTACATGA TTTCCGTAGT GCGGCGCAAT CTGGCGGTAA AGATGGTCGT 
ATGGATCCTA TCATGAGTGG TATGGCAATG CCTCTAAGCG ATCAAGATAT TCTTGATATC 
AGCGCTTATT TCTCTAGCCA AGCAATTCAA GTTGCTGAAG CGAAAGATGT TCCTGAGCTA 
GGTGCAAAAC TTTACAAAGG TGGCGATGTA TCACGCGGCA TCACAGCTTG TATGGCATGT 
CATGGTCCAG ATGCTAAAGG TGCTGAATCA GCAGGTTTCC CTGCATTAGC CGGTCAACAC 
GCTAACTACA TCAAGATCCA ACTGACTAAG TTCCGTGATG CAGGTCGCCA CAACGACCTC 
AACGGCATGA TGCAAGATGT CGCGAAAAAG TTAAGCGACA GTGATATCGA AGCATTATCT 
AAGTACATTG CTAGCCTGAA ATAG
 
Protein sequence
MKKLALALSV VVAAISSPAI AEGNAEAGKT KVIVCSACHG MDGNSMIDMY PKLAGQHATY 
LQKQLHDFRS AAQSGGKDGR MDPIMSGMAM PLSDQDILDI SAYFSSQAIQ VAEAKDVPEL 
GAKLYKGGDV SRGITACMAC HGPDAKGAES AGFPALAGQH ANYIKIQLTK FRDAGRHNDL 
NGMMQDVAKK LSDSDIEALS KYIASLK