| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3998 |
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| Symbol | engB |
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| ID | 4257856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4745860 |
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| End bp | 4746519 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638124687 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_740032 |
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| Protein GI | 114049482 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.468172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0228585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTGAAT CTCATATAGA TTTTCGCAGG GCGAAGTTTT TAATCAGTGC ACCTGACATT
GCACATTTGG ATCAATATCT GCCCGGCGAC GTTGGTGTTG AGATTGCTTT TGCTGGTCGC
TCCAATGCCG GAAAATCGAG TGCGCTCAAT GCATTAACTG AGCAGAAAAA CTTGGCGCGT
ACCAGTAAAA CGCCGGGTCG CACTCAGCTG ATTAACGTAT TTGAACTCGA TGCGCAGCGC
CGATTAGTCG ATTTACCGGG TTACGGCTTT GCCCAAGTGC CTTTAGCCAT GAAATTAAAA
TGGCAACAAT CCCTCGGTGA ATATTTGCAG AAGCGTGCGT GCTTAAGTGG CGTTGTGGTA
TTGATGGATA TTCGTCATCC GTTGAAAGAT CTGGATATGC AGATGATCGA ATGGGCGGTT
GCGAGTGAAA TTCCAGTACT CGCATTACTG ACTAAGTCCG ATAAATTGGC GCAAAGCGCG
AAGATGAAAA CCGTGAACGA AGTGCGTAAA GCGCTGGTTG AGTTTGGTGA TTGGGTACAG
GTTGAGCCTT TTTCTGCGCT CAAAGGCACG GGCAAACCTA AAGTGCTTAG TATCCTAAAC
GAATGGTGTC ATCCGCAATG GTTGGCCGAT GAGTTAGAAA ACCAAGAAGA CGCTGAGTAA
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| Protein sequence | MTESHIDFRR AKFLISAPDI AHLDQYLPGD VGVEIAFAGR SNAGKSSALN ALTEQKNLAR
TSKTPGRTQL INVFELDAQR RLVDLPGYGF AQVPLAMKLK WQQSLGEYLQ KRACLSGVVV
LMDIRHPLKD LDMQMIEWAV ASEIPVLALL TKSDKLAQSA KMKTVNEVRK ALVEFGDWVQ
VEPFSALKGT GKPKVLSILN EWCHPQWLAD ELENQEDAE
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