| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3996 |
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| Symbol | |
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| ID | 4257854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4741070 |
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| End bp | 4741726 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638124685 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_740030 |
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| Protein GI | 114049480 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000148784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0198242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCGCAGTATT GCTCAGTGGG TGCGGTGTTT TCGATGGAAC AGAGATCTAT
GAATCGGTTT TAACGTTATT ATCTCTGTCG AAAGCGGGGG CTCAATATCA ATGTTTTGCT
CCTGATATCA ATCAGATGCA TGTTGTTAAT CACTTCACGG GCGAAGTAGA CAAGACGGCG
ACACGAAATG TGCTGGTTGA ATCGGCACGT ATCGCCCGCG GCGAAGTAAA AGCAACCACC
GAACTCGATA TTACCGATTT CGATGCACTG GTTATCCCTG GCGGATTTGG GGCGGCGAAA
AATCTGTGTA ACTTCGCCAC GAATGGTAGT GAGTGTGAAG TGAATCCACT CGTTACTGAT
TTTATTAATG AATTTATTCT AGCGAAAAAG CCTGTCGGCT TTATTTGTAT AGCGCCTATG
ATGATCCCGC GTTTATATGG ACACGGCGCT AAGGGCACTA TCGGTAATGA TGTGGATACG
GTAGCAGCCT TTAATCTGAT GGGCGGCCAT CATCAGGCGG CGACTGTGCA TGATATCGTG
GTAGATGAGG CGAATAAGAT TGTCAGCACG CCCGCTTATA TGCTTGCGGG GAACATTGCC
GAGGCGCACT CTGGTATCGA GAAGCTGGTC GCCAAAGTAT TAGAGCTGGC CAAGTAA
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| Protein sequence | MKKIAVLLSG CGVFDGTEIY ESVLTLLSLS KAGAQYQCFA PDINQMHVVN HFTGEVDKTA
TRNVLVESAR IARGEVKATT ELDITDFDAL VIPGGFGAAK NLCNFATNGS ECEVNPLVTD
FINEFILAKK PVGFICIAPM MIPRLYGHGA KGTIGNDVDT VAAFNLMGGH HQAATVHDIV
VDEANKIVST PAYMLAGNIA EAHSGIEKLV AKVLELAK
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