| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3974 |
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| Symbol | |
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| ID | 4255979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4718263 |
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| End bp | 4719078 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638124663 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_740008 |
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| Protein GI | 114049458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.715653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT TACCAGAAGT CGAAGTCACC CGTCAGGGCA TTGCCCCACA TCTTGTCGAA
CAAACCGTGG TTGACCTCAT TGTCCGTAAT GCCTCATTGC GTTGGCCCGT TCCCGAACTT
GCCAAACAGA TCATCGGCCA AACCATACGC CAAGTACGCC GCCGCGCAAA ATACCTGTTA
ATCGATACCG ATGCCGGCAC CAGCATAGTG CATTTAGGGA TGTCGGGCAG CTTGCGGATC
CTCCCCCATG ACACGCCAGT GGAGAAGCAC GACCATATCG ATCTCGTCCT CGCCAACGGC
CGTATTCTGC GCTTTAACGA TCCGAGGCGT TTCGGTGCTT GGTTATGGTG CCAACTGCCG
GAGGAAGCCC ATCCGCTACT GGAAAAACTC GGGCCAGAAC CTTTAACCGA TGCCTTTAAC
GTCAATCAGT TAGCTGCCGC ACTGGCGGGC AAGAAGAAGG CCATCAAACT CTGCCTGATG
GATAACCATA TTGTGGTGGG TGTGGGAAAT ATTTACGCCA ACGAAGCACT GTTTGCCGCA
GGGATACATC CCGAGGCAGA AGCAGGCAAG ATAGATATTG AACGCTTAAC GGTACTGGTT
GCCGAGGTCA AACAAATCCT CGCCCACGCC ATAAAGCAGG GCGGCACTAC GCTTAAGGAC
TTCACCAATG CCGAGGGTAA ACCTGGCTAT TTCGCACAAA AACTGCATGT TTACGGCCGC
GGCGGCGAAA CTTGCACTCA GTGCGGCAAT CTACTCAGCG AAATCCGCCT GGGTCAACGC
ACCACAGTAT TTTGCGGCAT CTGCCAGACG CGTTAA
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| Protein sequence | MPELPEVEVT RQGIAPHLVE QTVVDLIVRN ASLRWPVPEL AKQIIGQTIR QVRRRAKYLL
IDTDAGTSIV HLGMSGSLRI LPHDTPVEKH DHIDLVLANG RILRFNDPRR FGAWLWCQLP
EEAHPLLEKL GPEPLTDAFN VNQLAAALAG KKKAIKLCLM DNHIVVGVGN IYANEALFAA
GIHPEAEAGK IDIERLTVLV AEVKQILAHA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR
GGETCTQCGN LLSEIRLGQR TTVFCGICQT R
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