Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3967 |
Symbol | |
ID | 4255972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4712055 |
End bp | 4712879 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638124656 |
Product | extracellular solute-binding protein |
Protein accession | YP_740001 |
Protein GI | 114049451 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2998] ABC-type tungstate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAACG TGAAATCCCA TATGAAGTCA TTACTGGGCC TGGTTGTTGC AGCCAGCATG CTCACAGTGT TACCCGCTCA ATCGGCTGAA GTGATCAAGT TAGCCACCAC CACTAGTACT GAAAACTCAG GCCTGTTAAA AGAATTACTG CCTAAGTTTG AAAGTGAATC AGGCTACAAA GTACAAGTTA TCGCAACGGG TACCGGTAAA GCGCTGAAAC TGGGCGAGCA AGGCGATGTG GATTTAGTGA TGACCCACGC CCCAAGTGCC GAAGCAAAAT TTGTTGCCAA CGGTTTTGGT GTTGAGCCAC GTGGCATTAT GGAAAACGAT TTCGTGGTGT TAGGCCCTAA AAACGACCCA GCAAAACTAC GTGAAAGCAA AACGGCTGAA GAAGCCTTCG CGAAAATCGC CAAATCTGGC TTACCTTTTG TGTCTCGTGG TGACAACTCT GGCACCCACA TCAAAGAGTT AGAAGTATGG AAAGCCGCAG GCGTGACTCC TGACTTCAAA GGTTACACCT CAGTAGGTCA AGGCATGGGT AAAACCCTGC TGATGGCAAA CGAATTACAA GGTTACACTC TGTCTGACCG TGGTACTTTC GTGGCTTACA AAACCAAGCT GGACTTAGGT GTGGATTTCG ATGGCGGTAA AACGCTGGCG AACCCATACC AAGTGATTCT GATCAACCCA GCTAAATACC CAGATCTGAA CCACAAAGGC GCCAAAGCCT TCAGTGACTG GCTGATCAGC AAAGAAGGTC AAGCCATGAT CAACAACTTC AAAGTTGAAG GCGAGCAACT GTTCAAGGCA ACCTATAGCG AATGA
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Protein sequence | MLNVKSHMKS LLGLVVAASM LTVLPAQSAE VIKLATTTST ENSGLLKELL PKFESESGYK VQVIATGTGK ALKLGEQGDV DLVMTHAPSA EAKFVANGFG VEPRGIMEND FVVLGPKNDP AKLRESKTAE EAFAKIAKSG LPFVSRGDNS GTHIKELEVW KAAGVTPDFK GYTSVGQGMG KTLLMANELQ GYTLSDRGTF VAYKTKLDLG VDFDGGKTLA NPYQVILINP AKYPDLNHKG AKAFSDWLIS KEGQAMINNF KVEGEQLFKA TYSE
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