Gene Shewmr7_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3967 
Symbol 
ID4255972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4712055 
End bp4712879 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID638124656 
Productextracellular solute-binding protein 
Protein accessionYP_740001 
Protein GI114049451 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAACG TGAAATCCCA TATGAAGTCA TTACTGGGCC TGGTTGTTGC AGCCAGCATG 
CTCACAGTGT TACCCGCTCA ATCGGCTGAA GTGATCAAGT TAGCCACCAC CACTAGTACT
GAAAACTCAG GCCTGTTAAA AGAATTACTG CCTAAGTTTG AAAGTGAATC AGGCTACAAA
GTACAAGTTA TCGCAACGGG TACCGGTAAA GCGCTGAAAC TGGGCGAGCA AGGCGATGTG
GATTTAGTGA TGACCCACGC CCCAAGTGCC GAAGCAAAAT TTGTTGCCAA CGGTTTTGGT
GTTGAGCCAC GTGGCATTAT GGAAAACGAT TTCGTGGTGT TAGGCCCTAA AAACGACCCA
GCAAAACTAC GTGAAAGCAA AACGGCTGAA GAAGCCTTCG CGAAAATCGC CAAATCTGGC
TTACCTTTTG TGTCTCGTGG TGACAACTCT GGCACCCACA TCAAAGAGTT AGAAGTATGG
AAAGCCGCAG GCGTGACTCC TGACTTCAAA GGTTACACCT CAGTAGGTCA AGGCATGGGT
AAAACCCTGC TGATGGCAAA CGAATTACAA GGTTACACTC TGTCTGACCG TGGTACTTTC
GTGGCTTACA AAACCAAGCT GGACTTAGGT GTGGATTTCG ATGGCGGTAA AACGCTGGCG
AACCCATACC AAGTGATTCT GATCAACCCA GCTAAATACC CAGATCTGAA CCACAAAGGC
GCCAAAGCCT TCAGTGACTG GCTGATCAGC AAAGAAGGTC AAGCCATGAT CAACAACTTC
AAAGTTGAAG GCGAGCAACT GTTCAAGGCA ACCTATAGCG AATGA
 
Protein sequence
MLNVKSHMKS LLGLVVAASM LTVLPAQSAE VIKLATTTST ENSGLLKELL PKFESESGYK 
VQVIATGTGK ALKLGEQGDV DLVMTHAPSA EAKFVANGFG VEPRGIMEND FVVLGPKNDP
AKLRESKTAE EAFAKIAKSG LPFVSRGDNS GTHIKELEVW KAAGVTPDFK GYTSVGQGMG
KTLLMANELQ GYTLSDRGTF VAYKTKLDLG VDFDGGKTLA NPYQVILINP AKYPDLNHKG
AKAFSDWLIS KEGQAMINNF KVEGEQLFKA TYSE