| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3965 |
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| Symbol | |
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| ID | 4255970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4708252 |
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| End bp | 4710387 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124654 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_739999 |
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| Protein GI | 114049449 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00131359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTTT TTACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAAGTGCGT
TATCGCATTC TGATCCTCAC CTTGCTGCCG ATTTTGCTCA CCTTGGTGAG TTTAGTGTTT
ATCACTATTT ACTGGAATAT CAGTTACACA GGCAAGCAAC TGTTTATGAA AGTAAAAGCC
GATCTGGCTG TGGCTGAAAA TACCCTGCAA CAGGTGCAAG TTCGTCAGGA GAAACAGCTC
GAGAGAGTAA TGACCTCATG GACTTTTCAA AATGATTTTC GGCCCATTCT CACGGGTGAG
TTGGCCCACA GGGCGAGCAT CGATGCCTTT TTAAATGAGC AAAAAAAGCA ACTCGATCTG
GATTTTCTAA GGCTTGTCAG TGTGGCCGAG GCCGCGTCAG ACCCTGATTT ACGACAAATT
TTACCGAAAA TGGGTGGTCT TTTACCCTAT TCGGGGCTGA TGGTGTTATC ACCTGAGCGT
TTGGCGCGGG TTGATCCGGA TTTAGCCCAA AGGGCGGCGA TTCCCTTACT AGCGACATTG
CGGGCGCAAA GCCCGAATAA ACAAGTGGAA GACCGTGGTC TACTGAGCCG CAGTTTGCTG
CCGATCCCCG ATTTTGAGGG CAAAGTGGCT TGGTATCTCG ATGGCGGCGT GCTGTTTAAT
CGGGATACGC GCATCGTCGA CCATATCCGC GACCTCGTGT ACGACAAGGG CACGTTGCCG
GAGCGTTCCA TCGGTACTGT GACCATTTTC CTCGACAATA TTCGTGTCTC AACCAACGTG
CCTTTGCATT TTTTCCCACA GTCAAATGAA TCCCAAGGGC GGGCACTCGG CAGTTTAGTG
TCGGAGGAAG TGCGCGAAAA AGTGCTGAAT CACGGTGAGT TATGGGTCGA TCGCGCCTTT
GTGTTTAACG ATTGGTTTAT TTCCGCCTAT GCGCCCTTAG AAGATATCCG TGGGCAACGT
GTCGGAATGA TCTACACTGG ATTCTCAGAA TCGCCCTTTA TTCATAACTA CCTGCTTAAT
ATCATCGAGT TAGGCACGAT TCTTATGCTG GTGCTGCTGA TCTCCGGCTT GTTGGTTTAC
CGCGGCGCGT ACAGCTTGTT GCAACCGATT GAGCGCATTC ATCATGTGGT GCAAGCGGTG
CAGTCTGGTC GCAATGTGCG TATTGGTGCC TTGGGGCTGG ACAGGGATAA CGAATTGTCG
AATCTTGCCG AGCAGTTCGA CCGTATGCTC GACTTATTGC AGCGGCGCAA CGCGCAAATC
CAATCCGCGG CCGAACAACT CGAGATGAAG GTCGAGGAGC GGACTCGTAG CCTGCAGGAT
AAGACTTTGG AATTGCAGCG CAACGTGGCG CTACTCAATG AGACTCGTCA GCAGTTAGTG
ACCAATGAAA AGTTAACCGC GCTGGGTGAG CTAACCGCAG GGATTGCCCA TGAGATCAAT
AATCCAACGG CGGTGATCCT CGGCAATATG GAGCTGCTGC GTTATGAGCT TGGAGATAAT
GCCGAGTCGG TAAAAGAGGA AATCGACCTT GTTATCCAAC AGGTTGGCCG TATTAGCACT
ATTATCCGCA GCCTGCTGCA ATACAGTCGT CCTGGTGAGT TTAACGCTCC CTTAGAGATG
CATCCAATTA CGCCTATCAT CGAGGAAATG CTGGTATTAG TACGGCACTC GATTCAAAAA
CAAGAAGTGG TGCTGATAAC TGAACTGAAC GCCAGCTGCC CAGTGCAGGT TAACCGCCCG
CAGTTGCTGC AAGTGCTGAT TAACCTTGTG GTTAACGCCG CCCATGCGAT GGATGGTAAG
GGCAGGATTT GGGTGCGAAC CTATGATTGG CTACAGCAAG ATATGCCGAT TGGGGTGAAA
ATTGAGGTCG AGGACGAAGG TTCGGGGATT GCGCCTGAGC AGCTAGGGCG GATTTTTGAT
CCCTTCTACA CCACACGTAA AGACGGCACA GGCCTTGGAT TATCTCTAAG TTACGGCATT
ATCAAGCGTA TCGGCGGCAC CATAGAAGTG AGTTCTGTAT TGGGTAAGGG GTCTATCTTC
ACCATTGGTT TGTACCATGA GGCGAAGGAA GATCAGCAAA ACAACCCCTA CGATGGCTTA
CATTTTTCCG GCCAAAGCAC CGAAATGTCA TCTTAG
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| Protein sequence | MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA
DLAVAENTLQ QVQVRQEKQL ERVMTSWTFQ NDFRPILTGE LAHRASIDAF LNEQKKQLDL
DFLRLVSVAE AASDPDLRQI LPKMGGLLPY SGLMVLSPER LARVDPDLAQ RAAIPLLATL
RAQSPNKQVE DRGLLSRSLL PIPDFEGKVA WYLDGGVLFN RDTRIVDHIR DLVYDKGTLP
ERSIGTVTIF LDNIRVSTNV PLHFFPQSNE SQGRALGSLV SEEVREKVLN HGELWVDRAF
VFNDWFISAY APLEDIRGQR VGMIYTGFSE SPFIHNYLLN IIELGTILML VLLISGLLVY
RGAYSLLQPI ERIHHVVQAV QSGRNVRIGA LGLDRDNELS NLAEQFDRML DLLQRRNAQI
QSAAEQLEMK VEERTRSLQD KTLELQRNVA LLNETRQQLV TNEKLTALGE LTAGIAHEIN
NPTAVILGNM ELLRYELGDN AESVKEEIDL VIQQVGRIST IIRSLLQYSR PGEFNAPLEM
HPITPIIEEM LVLVRHSIQK QEVVLITELN ASCPVQVNRP QLLQVLINLV VNAAHAMDGK
GRIWVRTYDW LQQDMPIGVK IEVEDEGSGI APEQLGRIFD PFYTTRKDGT GLGLSLSYGI
IKRIGGTIEV SSVLGKGSIF TIGLYHEAKE DQQNNPYDGL HFSGQSTEMS S
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