Gene Shewmr7_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3963 
Symbol 
ID4255968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4706776 
End bp4707429 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content49% 
IMG OID638124652 
Producthypothetical protein 
Protein accessionYP_739997 
Protein GI114049447 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000681461 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACCC CTGCGCAGCT TCGCCGCGCA CTCCTGCTAT TAGTGGGATT TCACATACTG 
ATTATTTGCG TCAGCAACTA CTTGGTACAA CTACCGTTTC AATTGTTTGG TTTTCACACC
ACTTGGGGCG CGTTTAGCTT TCCCTTTGTC TATCTCGCGA CCGATCTCAC AGTGCGTATC
TTTGGACAAA CACCAGCCCG TAGCATCATT CTCAAGGCCA TGGTGCCTGC GTTGATGATT
TCCTATGTCA TGGGTGTGGT ATTCCATCAA GGTAGCTTCC AAGGGATTGA TTCCTTAAGC
CAATGGAACA CTTTTGTGTT TCGCATTGCC TTCGCCAGCT TCGCGGCTTA TTTGATTGGC
CAGCTGATGG ATATCACAGT CTTTGCTCGC CTACGCCAGA GCCGTTCTTG GTGGGTCGCG
CCTGCGGCAT CGACCATTGT CGGTAACTTA GTCGACACCT TAGTGTTTTT CAGTGTCGCT
TTTTATGCCT CAACAGACAG CTTTATGGCA GCCAACTGGC CCGAAATCGC GGCCGTAGAT
TACAGCTTCA AATTACTCGT GAGCTTAGGG TTATTCCTGC CCGCCTACGG CGTCCTGCTG
AAGGTCTTAC AAGACAAGAT CTTGCAAACC AGTCCACAAA AATCATTTTC CTGA
 
Protein sequence
MLTPAQLRRA LLLLVGFHIL IICVSNYLVQ LPFQLFGFHT TWGAFSFPFV YLATDLTVRI 
FGQTPARSII LKAMVPALMI SYVMGVVFHQ GSFQGIDSLS QWNTFVFRIA FASFAAYLIG
QLMDITVFAR LRQSRSWWVA PAASTIVGNL VDTLVFFSVA FYASTDSFMA ANWPEIAAVD
YSFKLLVSLG LFLPAYGVLL KVLQDKILQT SPQKSFS