| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3960 |
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| Symbol | |
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| ID | 4255965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4701797 |
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| End bp | 4704022 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124649 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_739994 |
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| Protein GI | 114049444 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACCA GAAATACCGC CTTTAGAGTG CCGTCCTTAG CGCTGGCAAT TGGGCTGAGT
TTTACCGCCT CCGCCGATGA AACCGCCCGT GATCCCCTGC TGAATGTGAA TGAAGTGATT
GTCGTCCACG GCGAAGGCGC TGACGCGGAG CAATTGGCGA CCACCCATTG GAGCATCGAC
GAAGCCGAAA TTCGTGCTCT GGGTGCACAG ACTTTAGACC AAGTGCTGAA AAATGTACCA
GGCGTCTATA TCCGTGTGGG CGGCGATGGT ACTCCTAGGG TCGATATTCG TGGTTTTAAG
ACTCGCCATG TCACTTTATT GGTGAACGGC GTACCTATGA GCAGTGCCGA CGATGGCCAG
TTCGACCCGA GCGTGATCCC AACCAGCCAA ATTGCCTCGG TTGAAGTGTC GGTTGGGCCG
ACTTCAGTGC TGTACGGCCC AAGTGGTGCT GGCGGGGTGA TCAATATTAT TACTAAGCAA
GGCAGCACAG CCCCCGCTTT GTCTGGACGT TTAGAAGCGG GTAAAGACAA TACCTTTAAT
GGTGATATTA GCGCCGCTGG CTCGGGCGAT GATTGGCAGG GATTGGTGAG TGTGAGCCGC
CAGCAGACCG ATGGTTTCCC GATGTCGAAC GATTTCGAGC CAACTCAATA TCAAGACGGT
GAGCTGCGGG TTAACTCAGA TAAAGAAGTC ACCAACGTCT ATGCCCAAGG CAGTTATTGG
TTATCGGATA AGACTCAGCT GATCGCCAAT ATGGCGCTGC GTAATGGTGA GTGGGGTAAA
CCCTCACGTG ATGGAACTGG CAGCGGTAAG CTCAAGTATG AACGTACCGA CGACTATGAT
TCACATACTT TCCAACTCGG CTTAGCCCAT CAGTTTGACG ATACCTTTAC CCTGCGCGGA
TTTGGTTATC ACAATCAAAG CGATACCTTA GAAGCAGCCT ATGCCGATGA AACCTATCAA
GCATTGACGC AAACTCAAGA TGGCCGCTCC GTGGTGCAAG GGGTTAATTT ACAGTTAATC
ACCGATTTTC ATAAAGCAGG GCTGTTAACC ACCTCTGTGA TTGCTGAAGA GCAGAGCTGG
AAGTCTGTAG TGGACACTTA CTCCAGTAAC GCTGGCAGCG GTACTGGCAA TAACTCGGGT
ACCGGCACTG GTTCAGTTTC TGGCAGCGGC TCAGGAAGCG GCAGTGGAAC AGGCTCTGGC
GGTGGTACTG GAAGCGGCAG TGGAACAGGC TCTGGCGGTG GTACTGGAAG CGGCGGCGGA
ACAGGCTCTG GCGGTGGCAC GGGTAGCGGC AGTGGAACAG GTTCTGGCGG TGGCACGGGT
AGTGGCAGTG GAACAGGTTC TGGCGGTGGA AATGGTAGCG GTGGCGGTTC TGGCGGCGCT
GAAAACCTAA ATGATTCTGC ATGGTTATAT ACTGCTGCGG CCGAATATCA GTATCAGTCA
GAACATAACT ATGGCTTCAC CTTAGGTGGG GCTTTCCATT CACTCGATAC TTCAGACGGT
ACGGATGATA ACTACTCGGC GATGGCGTCT AGTTATTGGC AGATTGTGCC TGACTCTCGT
TTGAGCCTGA GTGTGGCACG CAAAGTACGT TTCCCTTCTA TGGTGAATTT GTACTCGCAA
TCATCGGGTA ACAGTGATTT AGAAGCGGAA GAATCTAAAC ATGTTGAGCT GGGTCTGGAT
CAAAACCTAC CCGCCAGTAC CGACTTCTCG CTCTACGGTT TTTACACCGA TGCGAAGAAC
TACATAGCTA AAGATACTGA TGGTTTCTAC CAAAATATGG GGCGCTATGA GTTCAAAGGG
GTTGATTTCC AGATTAACAA CCATGCGATT GAACATTTAG ATCTGAGCTT CTCTTACAGC
TTCCTAGACT CGAAAGAAAT GGAAGGCGAC GATACCTTAG ATGCGCTGCA ATACCGTCCT
CGTCACCAGC TGCGCTGGCA AATGAGCTAC GAATTCCCAT TCGAGACGCA AGTCCACCTC
AATGTGGAGC GTATCCTCGA TCAGGTTTAT GCGACTCAAG TGAAGGTAAA CGGAAAGAAC
CAGTATCAAC AGCAGTCGCT GGATAACTAC ACCTTAGTGG ATATCAACTT AGTGCAGCCG
CTGATCGCCG ATAAGTTAGA AGTGTATCTG CGCGCCACTA ACCTATTGGA TGAGAACTAC
TACCAGAGTG AAGCCTTGCC TCAGGCTGGC CGTCAGTTCT TCGTGGGTGT GAACTGGCAG
ATTTAA
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| Protein sequence | MITRNTAFRV PSLALAIGLS FTASADETAR DPLLNVNEVI VVHGEGADAE QLATTHWSID
EAEIRALGAQ TLDQVLKNVP GVYIRVGGDG TPRVDIRGFK TRHVTLLVNG VPMSSADDGQ
FDPSVIPTSQ IASVEVSVGP TSVLYGPSGA GGVINIITKQ GSTAPALSGR LEAGKDNTFN
GDISAAGSGD DWQGLVSVSR QQTDGFPMSN DFEPTQYQDG ELRVNSDKEV TNVYAQGSYW
LSDKTQLIAN MALRNGEWGK PSRDGTGSGK LKYERTDDYD SHTFQLGLAH QFDDTFTLRG
FGYHNQSDTL EAAYADETYQ ALTQTQDGRS VVQGVNLQLI TDFHKAGLLT TSVIAEEQSW
KSVVDTYSSN AGSGTGNNSG TGTGSVSGSG SGSGSGTGSG GGTGSGSGTG SGGGTGSGGG
TGSGGGTGSG SGTGSGGGTG SGSGTGSGGG NGSGGGSGGA ENLNDSAWLY TAAAEYQYQS
EHNYGFTLGG AFHSLDTSDG TDDNYSAMAS SYWQIVPDSR LSLSVARKVR FPSMVNLYSQ
SSGNSDLEAE ESKHVELGLD QNLPASTDFS LYGFYTDAKN YIAKDTDGFY QNMGRYEFKG
VDFQINNHAI EHLDLSFSYS FLDSKEMEGD DTLDALQYRP RHQLRWQMSY EFPFETQVHL
NVERILDQVY ATQVKVNGKN QYQQQSLDNY TLVDINLVQP LIADKLEVYL RATNLLDENY
YQSEALPQAG RQFFVGVNWQ I
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