| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3959 |
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| Symbol | |
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| ID | 4255964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4700428 |
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| End bp | 4701795 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638124648 |
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| Product | ABC transporter related |
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| Protein accession | YP_739993 |
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| Protein GI | 114049443 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC TCGAGCTCGA CGGTGTCAGC TTTAACTATG GCAGCCAGCT AGCCCCGGTT
TTACAGGAGC TTAAGCTCTC GATTGGCGCA GGCCAATGCC ATTGTGTGAG CGGGCCAACG
GGCTCGGGGA AATCGAGTCT ACTCAATCTA CTGGCGGGCG TGCTGTCGCG CCCCCATGAG
GGCGATATTT GGCGTCACCC AGAGCTGGTG ACTGGCTTAG TGATGCAGGA TCCTCAAACC
CAGCTACTGA GGCAAACCGT GGGCGCCGAA GTCGCCTTCG CCTTAGAGAA TCTCGGCATC
CCCGCCGAGA ATATGTTGCC TAAGGTGCAG TTAGCGCTGC GGCGCGTCGG GCTATTTTTA
CGGCTAGACA CTCAAGTCAG TACCCTCTCC CTTGGTCAAA AATACCGTTT GATGATTGCC
GCCCAGTTGG TGTGTGAGCC GCATTTACTC TTGCTCGATG AGCCATGGGC GCAGCTCGAT
GATCACGGCG TAAGCGAGCT ATTGGCTGTG CTGCGTAATC TGATTGCCGA AGGTATGGCA
TTGGTGCTGG TGGAACATAA TGCGGCGGCC TTTGCCGAGA TTATCCAGCA CTATTGGCAA
TTAGAGGCTG GCCGTTTATC CGAGGGAATA TACACTGTTA GCGATGCCCC AGTGCAGGAC
GTGCCAGTGA GAGCTTGGGG AGGCGCACAT CAATCAGGCA AAGTGCTGGT CAGTGCCGAG
GCGTTTGATT TCTGCTTCGA TGGTTGTCAG CCCTTGTTTA GTTGTCCGCA AGGGTTTCAA
CTGCATGCGG GCGAGATAGT GACCTTAGTG GGGGATAATG GCGCGGGCAA AACCAGCCTC
TTAAAATCCC TCGCTGGCAT GCTGCACTTA AAGTTGCGTT TGCCGCTCAA GGTGCTAGGC
CGTAAACCTA AACTCGGTGT GTACGGCGCC GAGTTAGGGT TATTGCTGCA AAGGCCGAGT
CGACAACTGT TTGAAACCAA TGTGCTGGCC GAGATGCAAT TTAGCTTGAA TCGTTTCGAG
CTTCCGACTG CGCGTGCCGA GCAAATGTTA CTCGATCTCG AGTTGAGCGC TCTGGCCGAA
CAGTCGCCCC ATAAGCTGTC CTATGGTCAG CAACACCTGA TTGCCTTGGC ATCCTTAGCC
TGCTTGCAGC CTAAGGTACT GCTACTCGAT GACCCGCTCG CGGGTATGGA TAAAGAGTAC
TATCGCAAAG TATGGTTTTT GCTCAAGCGC CTCAGCGCCC AAGGCTGTGC GATTCTGATG
ACCAGCCACA GGTTGGTGGA ACACGGTGCG GTGTCGCGGC AGTTAAGCCT GCGCCATGGG
TTGTTGGCAG AAGAAGCCAT GGGAATGGAG GAGCGCTATG TGGGTTAG
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| Protein sequence | MKLLELDGVS FNYGSQLAPV LQELKLSIGA GQCHCVSGPT GSGKSSLLNL LAGVLSRPHE
GDIWRHPELV TGLVMQDPQT QLLRQTVGAE VAFALENLGI PAENMLPKVQ LALRRVGLFL
RLDTQVSTLS LGQKYRLMIA AQLVCEPHLL LLDEPWAQLD DHGVSELLAV LRNLIAEGMA
LVLVEHNAAA FAEIIQHYWQ LEAGRLSEGI YTVSDAPVQD VPVRAWGGAH QSGKVLVSAE
AFDFCFDGCQ PLFSCPQGFQ LHAGEIVTLV GDNGAGKTSL LKSLAGMLHL KLRLPLKVLG
RKPKLGVYGA ELGLLLQRPS RQLFETNVLA EMQFSLNRFE LPTARAEQML LDLELSALAE
QSPHKLSYGQ QHLIALASLA CLQPKVLLLD DPLAGMDKEY YRKVWFLLKR LSAQGCAILM
TSHRLVEHGA VSRQLSLRHG LLAEEAMGME ERYVG
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