| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3951 |
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| Symbol | |
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| ID | 4255956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4692666 |
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| End bp | 4695719 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124640 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_739985 |
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| Protein GI | 114049435 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCT CTGTGATCCG TTTTTCGCTC ACTCAGCGAC TCTTTGTGCT GATTGTGGCG
CTGATCCTCA TGTTGGCAGG CGCACGCGCT TGGTTCGCCA TTCCCTTGGA TGCCTTTCCA
GATATTTCCC CAACCCAAGT GAAGATTATC CTCAAGGCTC CGGGCATGAC GCCGGAGGAG
ATCGAGGCCC AGATTACCGT CCCGATTGAA ACCGAGCTGC TCGGCATTCC GCGGCAATCG
ATTCTGCGCT CGACAACTAA GTACGCCATT AGCGACATTA CCCTCGATTT TGAAGAAGGC
ACGGATATCT ATTGGGCGCG CCAACAGGTG AGCGAGCGCC TCTCGGCGGT CTGGGACAGT
TTTCCCGAAG GCGTGAGTGG TGGTGTGGCG CCCATGAGCA CGCCGCTCAG TGAAATCTTT
ATGTTTTCAC TCGAAAACCC CAATCTTTCC CTGCTGGAGC GACGTCAATT ACTCGAGTGG
GAAATTCGGC CGCTGCTGCG CACAGTACCC GGCGTTGCCG ATGTGAATAT CCTCGGCGGT
TATGCCAAGA GTTTTAGTAT CAGCCCCAAT CCTGCGGCGA TGGCGGCTGC GGGTGTAAGC
TTTGCCGCGC TGCAACAGGC AATTGTGGAG AATAATCACA ACGAAGGTGC AGGTAAGCTC
ACCATAGGTA CAGACACCAT CATAGTGCGC TCCGAGGGAC GCATCGATGA TATCGACGAG
CTTAAACAGC TAGTGATCAA AACCGATAAT GCCAAGGTCT ATCGCTTGCA GGATCTCGCC
GATATCCAGA TTGGCCACCT TGCGCGCTAC GGCGCCGTCA CTAAGGATGG TAACGAAACC
GCCGAAGCCT TAATCATTGC CCTCAAGGAC GCCAATACGG CACAAGTGGT TAACAATATT
AAGGAAAAGC TGGCGCAAAT CAGCCTGACT CTCCCCGAAG GCAGCCAGAT AAACACCTTT
TACGACCGCG CTAACCTGAT CAATACCGCT ATCGAGACCA TCTCCAATGC GCTATTCGAG
GCCGTTGTGT TGGTCATCGT ATTGCTGGCG CTGTTTTTAG GGAATGTGCG CGCCGCGTTA
GTGGTATCCC TGTCGTTGCC ACTGGCCGCG CTATTCACCT TTTTGATGAT GGATCACTTC
AATCTTTCCG CAAACCTGAT GAGCCTCGGC GGCCTCGTTA TCGCCATCGG CATGTTGGTG
GACTCCTCCG TGGTCGTGGT TGAAAACATG GTGAATTTAA TCGCCACGAA ACAGCGTTTG
CCGCGTTTGC ACTTGATCTT TCGCGCCACC AAAGACGTCG CCATTCCGGT AGTCTCGGGC
ACGGTTATCG TGATCATAGT GTTCTCGCCA CTACTCACCC TCAGTGGTTT AGAAGGCAAA
CTCTTTACCC CAGTCGCCAT CACCATAGTG TTTGCCATGT TGTCGGCGCT GGTGTTATCG
CTGACAGTGA TCCCCGTGAT TGCCTCGTAC CTTGTCAACG AAAAGGCCGC GAAAGAACCT
AAGGCCATCG AAAAGCTCAA GCACCTTTAC CTTGGCAGCC TAAAAGCCTG CTTTGGTTGG
CAAAAACCTT TTATGCTCAC CGCCTTTAGC TTGCTGATTG TCAGTCTCGG CCTGTTTAGT
CTGGTGGGGA AAACCTTTAT GCCGACCTTA GATGAGGGCG ACATTATTCT CCAGTTAGAG
AAATCCCCTT CGATTTCCCT CGACGCTTCC ATCGCTATCG ATAAACAGAT CCAGCAAACC
CTGCTAAGCC AAATCCCCGA AATTAAGCAG ATGGTGGCGC GCACCGGCGC CGATGAGATA
GGTTTAGATC CCATGGGACT GAACGAAACC GATGTGTTTT TAGAGCTGGC GCCCCGCAGC
GAATGGCGTT TTTCGACCAA AGAGCAGCTT ATCGATGCCA TCCGCACTGT GCTGCTCAAA
TATCCCGGCG TGAACTTTAA CTTTACGCAA CCGATACAGA TGCGGGTGTC TGAAATGCTC
ACAGGCAGTA TTGGGGATGT CGCGATTAAA GTATTTGGTA ATGATATCGA GACCTTAGGC
AAACTCACTG GCGAAATAGA ACAACTGGTC ACCGCCACTC AGGGCAGCGT CGACGTTAAG
ATGGCGATGA TTGAGGGCAG CCCTTTTATC AATCTCACTT TAGATAACGA GCTGGCCCGT
GGGTTTGGGA TGAGCACTAT GGAGTTTGCC CGCTACCTCA AGAGCCAACT CGAAGGCGTG
GTCGTCACCG AAGTGCTGCA AGGGAAGAAG CGCACGCCCG TGCTTATCGC TAATAATCAG
GCGCAGATCA GCAACATTAA CGAACTGCAA AATCAGCTAT TGGTGATGCC AGATCATTCC
CTAAAACGCC TAAGCGATGT GGCCGTTTTG AGCTATAAAC AGGGCCCAAT CCTTATCGAG
CGGGAACAGG GAAATCGCTT TTCGGTGATC ACCACCAACG TCCAAGGGCG GGATATTGTG
GGCTTTGTGG AGGAGCTTAA CAGCAAAATT ACCAAAGAAA TCAAACTGCC CAGCGGCTAT
AGCGTTAGCT TCGGTGGCGA ATTTGAAAAC CAGCAGCGCG CCACCAGCAA TTTGTTACTG
GTGATCCCCA TAGCTATCGC ACTGATCACT TTGATTTTAT TCACCACCTT CGGCTCTCTA
GCAAAATCGG GATTAATCCT CGCTAACGTC CCGTTCGCCA TGATGGGCGG TATCGTCAGC
TTGTATCTCT CGGGGGAATA CCTCTCGGTG CCCGCCTCGG TAGGTTTTAT CGCCCTGCTG
GGTGTCGCCG TGCTTAACGG CGTGGTGATG GTCAGTTATT ACGAACAAAC CAAATACTTA
TTCGGTAGCC TCAGGGAGCG AGTCGAACAG GGCGCCGCCC GGCGACTCAG GCCCATTCTG
ATGACGGCCA CCACCGCTAT GTTTGGTTTG ATCCCCTTAG TGTTCGCCTC GGGCCCAGGT
GCTGAAATCC AAAAACCCTT GGCCATTGTG GTGATCGGCG GATTGCTCAC ATCGACCATT
ACAACCCTGT ATTTACTGCC CATGTTGTAT TTTTGGCTGG AGAAACGCCG ATGA
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| Protein sequence | MLTSVIRFSL TQRLFVLIVA LILMLAGARA WFAIPLDAFP DISPTQVKII LKAPGMTPEE
IEAQITVPIE TELLGIPRQS ILRSTTKYAI SDITLDFEEG TDIYWARQQV SERLSAVWDS
FPEGVSGGVA PMSTPLSEIF MFSLENPNLS LLERRQLLEW EIRPLLRTVP GVADVNILGG
YAKSFSISPN PAAMAAAGVS FAALQQAIVE NNHNEGAGKL TIGTDTIIVR SEGRIDDIDE
LKQLVIKTDN AKVYRLQDLA DIQIGHLARY GAVTKDGNET AEALIIALKD ANTAQVVNNI
KEKLAQISLT LPEGSQINTF YDRANLINTA IETISNALFE AVVLVIVLLA LFLGNVRAAL
VVSLSLPLAA LFTFLMMDHF NLSANLMSLG GLVIAIGMLV DSSVVVVENM VNLIATKQRL
PRLHLIFRAT KDVAIPVVSG TVIVIIVFSP LLTLSGLEGK LFTPVAITIV FAMLSALVLS
LTVIPVIASY LVNEKAAKEP KAIEKLKHLY LGSLKACFGW QKPFMLTAFS LLIVSLGLFS
LVGKTFMPTL DEGDIILQLE KSPSISLDAS IAIDKQIQQT LLSQIPEIKQ MVARTGADEI
GLDPMGLNET DVFLELAPRS EWRFSTKEQL IDAIRTVLLK YPGVNFNFTQ PIQMRVSEML
TGSIGDVAIK VFGNDIETLG KLTGEIEQLV TATQGSVDVK MAMIEGSPFI NLTLDNELAR
GFGMSTMEFA RYLKSQLEGV VVTEVLQGKK RTPVLIANNQ AQISNINELQ NQLLVMPDHS
LKRLSDVAVL SYKQGPILIE REQGNRFSVI TTNVQGRDIV GFVEELNSKI TKEIKLPSGY
SVSFGGEFEN QQRATSNLLL VIPIAIALIT LILFTTFGSL AKSGLILANV PFAMMGGIVS
LYLSGEYLSV PASVGFIALL GVAVLNGVVM VSYYEQTKYL FGSLRERVEQ GAARRLRPIL
MTATTAMFGL IPLVFASGPG AEIQKPLAIV VIGGLLTSTI TTLYLLPMLY FWLEKRR
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